| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799911
Identifier: 108799911
GI number: 108799911
Start: 3104254
End: 3105195
Strand: Reverse
Name: 108799911
Synonym: Mmcs_2945
Alternate gene names: NA
Gene position: 3105195-3104254 (Counterclockwise)
Preceding gene: 108799912
Following gene: 108799910
Centisome position: 54.43
GC content: 68.58
Gene sequence:
>942_bases GTGATATCCCTGCGCGCACACGCGATCTCGCTGGCGGCGGTCTTCCTGGCGTTGGCCATCGGCGTCGCGCTGGGATCGGG ACTGCTGTCGAACACGGTGTTGTCCGGGTTACAGGACGACAAACAGGATCTGCAGAACCAGATCAACAGCCTCACCGACG AGAAGAACGGACTGAACCAAAGGCTCAGCGCCGCAGGGGAGTTCGATGCGCAGATCGCCCCGCGCGTGTTACGCGACACG CTCGGCGGCAAGTCGGTGGTCCTGTTCCGCACACCCGATGCCGCCGACGACGACGTGGACGCGCTGACCCGGTCGGTCGG ACAGGCCGGCGGCACGGTCAGTGGTACGGTCACGCTCACCCAGGAGTTCGTGGACGCCAACTCCGCGGAAAAGCTTCTGT CGGTGGTGAATTCGCCGATCGTGCCGGCCGGGAAGCAACTGAGCACCGCCGCGGTGGATCAGGGTTCACAGGCCGGGGAT CTGCTCGGTATCGCGTTGCTGCTCAACAAGGACCCCGCCGCACCGGTCGTGAGCGACGCCGAGCGCGACACCGTGTTGAC CGCCCTGCGTGACACCGGCTTCCTCACCTTCGGCACCGATCCCGTCGGCGCGGCGAACACGGCGCTGATCGTGACCGGCG GCGCCCTCGGCGACGATGCGGGCAACCGCGGTGCCACGGTGGCTCGGTTCGCGGCCGGACTGGCCAAACACGGGTCGGGC ACCGTCCTGGTGGGCCGGGACGGGTCCGCCTCGGGGACCGGCGCGGTCGCGGTGACCAGATCGGATCCGGCATTGACCGG AGCGGTGAGCACCGTCGATGACGTGGACACCGAATCCGGACGGATCACCTCGGTGCTCGCACTGGCCGATCTGATCGGCG GTGCCCGGCCGGGCCAGTACGGAGTCGGTCAGGGGGCGGGCGCGGTCACGATCGCCCAGTGA
Upstream 100 bases:
>100_bases GTGGGTCTCGCGCGCCGACGCCGCGGTCATCGAGTGGATCCAGCAGTACTGGAACCAGCTCGTGCTGTGGGCCCAGGGTC TGGTCAGTTAGGCGGTCACG
Downstream 100 bases:
>100_bases GGCCCGGCGCGCCACCGACGACCTGTCGGAGTCGGTGTTAGGGTGGGGTTCCGTGGGTCGGCAGGCCCCAAAGCTAGGAG CAAGCCTAGAAAAGTAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MISLRAHAISLAAVFLALAIGVALGSGLLSNTVLSGLQDDKQDLQNQINSLTDEKNGLNQRLSAAGEFDAQIAPRVLRDT LGGKSVVLFRTPDAADDDVDALTRSVGQAGGTVSGTVTLTQEFVDANSAEKLLSVVNSPIVPAGKQLSTAAVDQGSQAGD LLGIALLLNKDPAAPVVSDAERDTVLTALRDTGFLTFGTDPVGAANTALIVTGGALGDDAGNRGATVARFAAGLAKHGSG TVLVGRDGSASGTGAVAVTRSDPALTGAVSTVDDVDTESGRITSVLALADLIGGARPGQYGVGQGAGAVTIAQ
Sequences:
>Translated_313_residues MISLRAHAISLAAVFLALAIGVALGSGLLSNTVLSGLQDDKQDLQNQINSLTDEKNGLNQRLSAAGEFDAQIAPRVLRDT LGGKSVVLFRTPDAADDDVDALTRSVGQAGGTVSGTVTLTQEFVDANSAEKLLSVVNSPIVPAGKQLSTAAVDQGSQAGD LLGIALLLNKDPAAPVVSDAERDTVLTALRDTGFLTFGTDPVGAANTALIVTGGALGDDAGNRGATVARFAAGLAKHGSG TVLVGRDGSASGTGAVAVTRSDPALTGAVSTVDDVDTESGRITSVLALADLIGGARPGQYGVGQGAGAVTIAQ >Mature_313_residues MISLRAHAISLAAVFLALAIGVALGSGLLSNTVLSGLQDDKQDLQNQINSLTDEKNGLNQRLSAAGEFDAQIAPRVLRDT LGGKSVVLFRTPDAADDDVDALTRSVGQAGGTVSGTVTLTQEFVDANSAEKLLSVVNSPIVPAGKQLSTAAVDQGSQAGD LLGIALLLNKDPAAPVVSDAERDTVLTALRDTGFLTFGTDPVGAANTALIVTGGALGDDAGNRGATVARFAAGLAKHGSG TVLVGRDGSASGTGAVAVTRSDPALTGAVSTVDDVDTESGRITSVLALADLIGGARPGQYGVGQGAGAVTIAQ
Specific function: Likely involved in transport processes across the outer membrane. Appears to be specific for mycolic acid-containing membranes [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021522 [H]
Pfam domain/function: PF11382 DUF3186 [H]
EC number: NA
Molecular weight: Translated: 31151; Mature: 31151
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLRAHAISLAAVFLALAIGVALGSGLLSNTVLSGLQDDKQDLQNQINSLTDEKNGLNQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHH RLSAAGEFDAQIAPRVLRDTLGGKSVVLFRTPDAADDDVDALTRSVGQAGGTVSGTVTLT HHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEE QEFVDANSAEKLLSVVNSPIVPAGKQLSTAAVDQGSQAGDLLGIALLLNKDPAAPVVSDA HHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCC ERDTVLTALRDTGFLTFGTDPVGAANTALIVTGGALGDDAGNRGATVARFAAGLAKHGSG CHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC TVLVGRDGSASGTGAVAVTRSDPALTGAVSTVDDVDTESGRITSVLALADLIGGARPGQY EEEEECCCCCCCCCEEEEECCCCCHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC GVGQGAGAVTIAQ CCCCCCCEEEECC >Mature Secondary Structure MISLRAHAISLAAVFLALAIGVALGSGLLSNTVLSGLQDDKQDLQNQINSLTDEKNGLNQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHH RLSAAGEFDAQIAPRVLRDTLGGKSVVLFRTPDAADDDVDALTRSVGQAGGTVSGTVTLT HHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEE QEFVDANSAEKLLSVVNSPIVPAGKQLSTAAVDQGSQAGDLLGIALLLNKDPAAPVVSDA HHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCC ERDTVLTALRDTGFLTFGTDPVGAANTALIVTGGALGDDAGNRGATVARFAAGLAKHGSG CHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC TVLVGRDGSASGTGAVAVTRSDPALTGAVSTVDDVDTESGRITSVLALADLIGGARPGQY EEEEECCCCCCCCCEEEEECCCCCHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC GVGQGAGAVTIAQ CCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]