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The map label for this gene is yfcA [H]

Identifier: 108799891

GI number: 108799891

Start: 3081955

End: 3082737

Strand: Reverse

Name: yfcA [H]

Synonym: Mmcs_2925

Alternate gene names: 108799891

Gene position: 3082737-3081955 (Counterclockwise)

Preceding gene: 108799892

Following gene: 108799887

Centisome position: 54.03

GC content: 69.99

Gene sequence:

>783_bases
GTGCCCGTCGTCGACATGGTCCTCATCGCCCTAGCGGGGGTGGGTGCGGGCGCCATCAACGCGATCGTCGGGTCGGGCAC
CCTGATCACGTTCCCGACGCTCGTCGCGCTCGGTTATCCGCCGGTCACGGCGACCATGTCGAACGCGGTCGGACTGGTGG
CCGGGGGAGTGTCCGGCACCTGGGGTTACCGCCGCGAACTGCGCGGGCAATGGCATCGGCTGCGCTGGCAGATCCCGGGT
TCCCTCCTTGGAGCGATGGCGGGGGCGTGGCTGCTGCTGCACCTGCCCGAGAAGGTGTTCATCGCGATCGTCCCGGTGCT
GCTGATCGCGGCGCTGATCCTGGTGATCGTCGGCCCGAGGATCCAGGCGTGGGCCAGGCAGCGGTCCGAGAGCGCCGGGC
GCTCGCTCGACCACATCAGCCGCGGCAGGATGGCCGCGCTGGTGATCGGGACGTTCCTCGTCGGCGTGTACGGCGGCTAC
TTCACCGCGGCGCAGGGGATCCTGCTGATCGCGGTCATGGGGGCGCTGCTGCCCGAGGACATGCAACGGATGAACGCCGC
CAAGAACCTGCTGTCGCTGATCGTGAACGTCGTCGCGGCCGTCGCGTACACGTTGGTCGCCTTCGACCGGATCAGCTGGG
CCGCTGCGGGTCTCATCGCGGTCGGTTCGCTGCTCGGCGGGTTCCTCGGGGCGCACTACGGCCGACGGCTGTCGCCGAAC
GCCCTGCGGGCGGTCATCGTCGTGGTCGGCCTGATCGGGCTGTGGCGGCTGGTGACCGTCTAG

Upstream 100 bases:

>100_bases
AGGAACTCGAAGCCGAGGTCGCGGTCGTCGAGCGGCCGGCCGAAACCGCCGACGAGGTGCGCTGAGGCCGGTCTGAGCGG
TACACACTAGGGTTCCCCGG

Downstream 100 bases:

>100_bases
AACCGTGTGCGCTTGTCCTCCTGGGCGAGGACGTCCTCGAGGTCGCCGAGCCGGTTCAACCCCTGTACCGCCCGGCGGGT
GCGCATGTTGCGCTCGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MPVVDMVLIALAGVGAGAINAIVGSGTLITFPTLVALGYPPVTATMSNAVGLVAGGVSGTWGYRRELRGQWHRLRWQIPG
SLLGAMAGAWLLLHLPEKVFIAIVPVLLIAALILVIVGPRIQAWARQRSESAGRSLDHISRGRMAALVIGTFLVGVYGGY
FTAAQGILLIAVMGALLPEDMQRMNAAKNLLSLIVNVVAAVAYTLVAFDRISWAAAGLIAVGSLLGGFLGAHYGRRLSPN
ALRAVIVVVGLIGLWRLVTV

Sequences:

>Translated_260_residues
MPVVDMVLIALAGVGAGAINAIVGSGTLITFPTLVALGYPPVTATMSNAVGLVAGGVSGTWGYRRELRGQWHRLRWQIPG
SLLGAMAGAWLLLHLPEKVFIAIVPVLLIAALILVIVGPRIQAWARQRSESAGRSLDHISRGRMAALVIGTFLVGVYGGY
FTAAQGILLIAVMGALLPEDMQRMNAAKNLLSLIVNVVAAVAYTLVAFDRISWAAAGLIAVGSLLGGFLGAHYGRRLSPN
ALRAVIVVVGLIGLWRLVTV
>Mature_259_residues
PVVDMVLIALAGVGAGAINAIVGSGTLITFPTLVALGYPPVTATMSNAVGLVAGGVSGTWGYRRELRGQWHRLRWQIPGS
LLGAMAGAWLLLHLPEKVFIAIVPVLLIAALILVIVGPRIQAWARQRSESAGRSLDHISRGRMAALVIGTFLVGVYGGYF
TAAQGILLIAVMGALLPEDMQRMNAAKNLLSLIVNVVAAVAYTLVAFDRISWAAAGLIAVGSLLGGFLGAHYGRRLSPNA
LRAVIVVVGLIGLWRLVTV

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=238, Percent_Identity=27.7310924369748, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27243; Mature: 27112

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVVDMVLIALAGVGAGAINAIVGSGTLITFPTLVALGYPPVTATMSNAVGLVAGGVSGT
CHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
WGYRRELRGQWHRLRWQIPGSLLGAMAGAWLLLHLPEKVFIAIVPVLLIAALILVIVGPR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH
IQAWARQRSESAGRSLDHISRGRMAALVIGTFLVGVYGGYFTAAQGILLIAVMGALLPED
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
MQRMNAAKNLLSLIVNVVAAVAYTLVAFDRISWAAAGLIAVGSLLGGFLGAHYGRRLSPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ALRAVIVVVGLIGLWRLVTV
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]