| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799884
Identifier: 108799884
GI number: 108799884
Start: 3076361
End: 3077461
Strand: Reverse
Name: 108799884
Synonym: Mmcs_2918
Alternate gene names: NA
Gene position: 3077461-3076361 (Counterclockwise)
Preceding gene: 108799885
Following gene: 108799883
Centisome position: 53.94
GC content: 64.4
Gene sequence:
>1101_bases ATGACAGACGTCACCGACGCCGAGACCGTGTCGCTGCTGGAGGGCATGGTCAACGGTGAATGGCTCGACGCGCAAGTGTT TCCACCACTGGAATGGGCGGTCGAAGGCATCGTGCCCGAAGGCTTCGGCCTGCTCGTCGCACCACCCAAAGCGGGCAAGT CGTGGATGGTCGCGGGCATCGGATTAGCGTGCGCAATCGGCGGATACGCATTCGGCAAGATTCCAGTCAAGCAACGCCCC GTGCTGTACCTCGCCCTTGAGGACGGGCACCGCCGCCTACAGGACCGGTTCCGCACCATCACCGAGGGTGACCCCATCCC GGCCGGCATCAACGTGATGGTCACCGCACGCACCTACGAAATCCCCGGCATCATCGCCGAATACCTTGCCCTGCACCACG GTAAGCAACCCCTCATCATCCTCGACACCCTCGGCAAGGTGAAACCACCCAAGCGTCCCGGCGAGGAATCCTATTCAGCG GACTACGCCATCGGCGGCAGGCTCAAGGAACTCATCGACTCCGAGCCCGGAGCGACCCTGCTCTGCGTACACCACACCCG CAAAGCCGAGTCCGCCGACTTCGTCGACGCCGTCTCGGGAACGCAGGGTATCGCTGGCTCGGCTGACTTCGTGCTGGTGC TCACCCGCAAACGCCAAGACGACAAAGCCGTCCTGGCCGTCACCGGCCGCGACGTACCCGAGAACGAGTACGCACTGACA ACGGCCGCGGGCCGTTGGGTGCTCGACGGCATGGACCTCATGGACGCCGCCGCCGCGGTGGCCAAGCGCAAGGACTCCGA GAACCTCGGCGACCGCAGCATCGACGCCCTGATGTTCGTCAACAGCCGGCCCCTCGGCACACGCCAGGCCGACCTAGCGA CGCACCTCGGCATCGACAACGACACAGCGGGCCGTTATCTGCGCCGACTCCACGACGCAGGACGCATCGGTAAACGCACC CGCGGCATCTACACACCACTGTCCGAAGTGTCCGAAGTGTCCGTTTTGGACGTACCCGCACGTCAACCCGACCAGGAAGA ACACCCCCAAACGGACACAACGGACACAACGGACACCCCCTTCGACGGGTGCGAGTCATGA
Upstream 100 bases:
>100_bases AAGCCCAAGCCGCCACCGGGAAAGACGACATCCTCGCTGTCCTCGCCTACTGGGCCCGCAAAGACCGCGACATGGTCATC ACCGTCGAGGACGGTGACCA
Downstream 100 bases:
>100_bases ACCGCGCGGAACGCCGCAAGCTCCCACCTGCCGTGCGGGCCGTAGCAGACGGATACCGCTGTCCCGACTGCGACAACACC ACCCGTGTCTCACTCGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: RecA-Family ATPase-Like Protein
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTDVTDAETVSLLEGMVNGEWLDAQVFPPLEWAVEGIVPEGFGLLVAPPKAGKSWMVAGIGLACAIGGYAFGKIPVKQRP VLYLALEDGHRRLQDRFRTITEGDPIPAGINVMVTARTYEIPGIIAEYLALHHGKQPLIILDTLGKVKPPKRPGEESYSA DYAIGGRLKELIDSEPGATLLCVHHTRKAESADFVDAVSGTQGIAGSADFVLVLTRKRQDDKAVLAVTGRDVPENEYALT TAAGRWVLDGMDLMDAAAAVAKRKDSENLGDRSIDALMFVNSRPLGTRQADLATHLGIDNDTAGRYLRRLHDAGRIGKRT RGIYTPLSEVSEVSVLDVPARQPDQEEHPQTDTTDTTDTPFDGCES
Sequences:
>Translated_366_residues MTDVTDAETVSLLEGMVNGEWLDAQVFPPLEWAVEGIVPEGFGLLVAPPKAGKSWMVAGIGLACAIGGYAFGKIPVKQRP VLYLALEDGHRRLQDRFRTITEGDPIPAGINVMVTARTYEIPGIIAEYLALHHGKQPLIILDTLGKVKPPKRPGEESYSA DYAIGGRLKELIDSEPGATLLCVHHTRKAESADFVDAVSGTQGIAGSADFVLVLTRKRQDDKAVLAVTGRDVPENEYALT TAAGRWVLDGMDLMDAAAAVAKRKDSENLGDRSIDALMFVNSRPLGTRQADLATHLGIDNDTAGRYLRRLHDAGRIGKRT RGIYTPLSEVSEVSVLDVPARQPDQEEHPQTDTTDTTDTPFDGCES >Mature_365_residues TDVTDAETVSLLEGMVNGEWLDAQVFPPLEWAVEGIVPEGFGLLVAPPKAGKSWMVAGIGLACAIGGYAFGKIPVKQRPV LYLALEDGHRRLQDRFRTITEGDPIPAGINVMVTARTYEIPGIIAEYLALHHGKQPLIILDTLGKVKPPKRPGEESYSAD YAIGGRLKELIDSEPGATLLCVHHTRKAESADFVDAVSGTQGIAGSADFVLVLTRKRQDDKAVLAVTGRDVPENEYALTT AAGRWVLDGMDLMDAAAAVAKRKDSENLGDRSIDALMFVNSRPLGTRQADLATHLGIDNDTAGRYLRRLHDAGRIGKRTR GIYTPLSEVSEVSVLDVPARQPDQEEHPQTDTTDTTDTPFDGCES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39564; Mature: 39433
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVTDAETVSLLEGMVNGEWLDAQVFPPLEWAVEGIVPEGFGLLVAPPKAGKSWMVAGI CCCCCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEHH GLACAIGGYAFGKIPVKQRPVLYLALEDGHRRLQDRFRTITEGDPIPAGINVMVTARTYE HHHHHHCCCEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEE IPGIIAEYLALHHGKQPLIILDTLGKVKPPKRPGEESYSADYAIGGRLKELIDSEPGATL CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCEE LCVHHTRKAESADFVDAVSGTQGIAGSADFVLVLTRKRQDDKAVLAVTGRDVPENEYALT EEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEE TAAGRWVLDGMDLMDAAAAVAKRKDSENLGDRSIDALMFVNSRPLGTRQADLATHLGIDN EECCCEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCC DTAGRYLRRLHDAGRIGKRTRGIYTPLSEVSEVSVLDVPARQPDQEEHPQTDTTDTTDTP CHHHHHHHHHHHHHHHCHHHCCCCCCHHHHCCEEEEECCCCCCCHHHCCCCCCCCCCCCC FDGCES CCCCCC >Mature Secondary Structure TDVTDAETVSLLEGMVNGEWLDAQVFPPLEWAVEGIVPEGFGLLVAPPKAGKSWMVAGI CCCCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEHH GLACAIGGYAFGKIPVKQRPVLYLALEDGHRRLQDRFRTITEGDPIPAGINVMVTARTYE HHHHHHCCCEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEE IPGIIAEYLALHHGKQPLIILDTLGKVKPPKRPGEESYSADYAIGGRLKELIDSEPGATL CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCEE LCVHHTRKAESADFVDAVSGTQGIAGSADFVLVLTRKRQDDKAVLAVTGRDVPENEYALT EEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEE TAAGRWVLDGMDLMDAAAAVAKRKDSENLGDRSIDALMFVNSRPLGTRQADLATHLGIDN EECCCEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCC DTAGRYLRRLHDAGRIGKRTRGIYTPLSEVSEVSVLDVPARQPDQEEHPQTDTTDTTDTP CHHHHHHHHHHHHHHHCHHHCCCCCCHHHHCCEEEEECCCCCCCHHHCCCCCCCCCCCCC FDGCES CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA