| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799879
Identifier: 108799879
GI number: 108799879
Start: 3072064
End: 3073383
Strand: Reverse
Name: 108799879
Synonym: Mmcs_2913
Alternate gene names: NA
Gene position: 3073383-3072064 (Counterclockwise)
Preceding gene: 108799880
Following gene: 108799878
Centisome position: 53.87
GC content: 65.76
Gene sequence:
>1320_bases ATGAACGACCTATTGCAGAAGCTGTTGCAGAAACTCGACGAACCCATCGCCCGATACTCCGACCTCGAGCGGTACTACAC AGGCACGCAACCGTTGGCGTTCCTGTCACCAGAAGCCAAAGAGGCGTTGGGAACCCGCTTCGGCCGCATGGCGTCGAACT TGCCCCGTTTGGCAGTCACCAGCCTGACCGAGCGACTGCGCGTCACCGGTTTCACCGGGGCCGACGTGTGGGATGACTGG CTGCGCAACGATATGGATCAGGAGTCGGCGACCGCGCATCGCGAAGCCCTGTTGCTCGGCTCAAGCTACGTCATCGTCTG GGCGGACCGCTTCGGCCGGCCGCTGGTGACCGTGGAGAGCGCGAAGCAGATGGCGTGTGTGCGTGACCCCGGCACGCGCC GTATCACCGCCGCGGTGAAACGCTGGGAGACCGACACCACTACCGAGGCAGTGCTCTACGGACCCGAGGAAATCGTGCGG TACCGCGCCAACCAGACCGGCGCCACCGTCGACGGATTCAAGGCAGTGGAGTCCATCGCCAACCCGCTCGGCGTGGTCCC GGTGGTTCGCCTGCTCAACAGTGACCGCATCCTCGACGAAGGCGTGAGCGAGATTGAAGACCTCAAACCGTTGTGCGACG GGCTAGCGAAGGTGCTCACCGATATGATGGTGTCCAGCGAATACGTCGGACGCCCTCGCAGGACCGCCACGGGCATCGAA CTCGTCGAAGAACCCGTCCTCGACGCCAATGGGAATCCGACCGGCGAAACGGTGGCGGTCAACCCGTTCCCCGAGGGCAA CCGGATGATGGTGTCGGAGAACCACGAAGCCAAGTTCGGGCAACTCGACGCCGCCGACCTCGGCGGCTACGAGGCAGCCG TGCGGGTGCTGCTCGGCCAGGTGATGGCGGTGTCGGCGCTGCCAGCGCACTACGTCGGCCAACTCTCCGACACTCCCGCA TCCGCGGATGCGCTGCGCGCTGCCGAAGCATCGTTGACTGCGAGAGCCGAAGCGCGCCAACAGCAGTTCGGACGCTCATG GGAAGACGTCGCCCGATTGGTTGTGGCCGTGCGTGATGGCGTCGACCCGCTCGGCGTGGACGTCCGCGTCAAGTGGGCCG ACGCCAGCACCCGCAGCGTCGCAGCCGAAGCGGACGCCGTCACCAAGTTGTTCGCCGCCGGCCTGCTGCCCGCCTCGTAT GCCTTGCAGCGGCTCGGGTATTCCGACGATGAAATCCTCGAGATCCGCGCCGCACGACGAGCCGAAACGCTCGACGGTCA GGGCGTCAACCTCGCGGCGCTGCCTCGGGAGGTCGCGTGA
Upstream 100 bases:
>100_bases CCGCCCGAAAGATCGACCTGGCGGCCTGCCTGGTCATGGCCCATTCCCGCGCCACCTGGCGCGCAACCCACAAGAAACGA AAGAGAGCAGTGAGTTTCCG
Downstream 100 bases:
>100_bases CCGCCGCCGTCGACCTGTACCAACTCGACACCGGCCGACTGTCCGAGGGCACTGAGCGCGCCGTGCTCGGCGTCTACGCG CAGTGGGTGACCGGCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MNDLLQKLLQKLDEPIARYSDLERYYTGTQPLAFLSPEAKEALGTRFGRMASNLPRLAVTSLTERLRVTGFTGADVWDDW LRNDMDQESATAHREALLLGSSYVIVWADRFGRPLVTVESAKQMACVRDPGTRRITAAVKRWETDTTTEAVLYGPEEIVR YRANQTGATVDGFKAVESIANPLGVVPVVRLLNSDRILDEGVSEIEDLKPLCDGLAKVLTDMMVSSEYVGRPRRTATGIE LVEEPVLDANGNPTGETVAVNPFPEGNRMMVSENHEAKFGQLDAADLGGYEAAVRVLLGQVMAVSALPAHYVGQLSDTPA SADALRAAEASLTARAEARQQQFGRSWEDVARLVVAVRDGVDPLGVDVRVKWADASTRSVAAEADAVTKLFAAGLLPASY ALQRLGYSDDEILEIRAARRAETLDGQGVNLAALPREVA
Sequences:
>Translated_439_residues MNDLLQKLLQKLDEPIARYSDLERYYTGTQPLAFLSPEAKEALGTRFGRMASNLPRLAVTSLTERLRVTGFTGADVWDDW LRNDMDQESATAHREALLLGSSYVIVWADRFGRPLVTVESAKQMACVRDPGTRRITAAVKRWETDTTTEAVLYGPEEIVR YRANQTGATVDGFKAVESIANPLGVVPVVRLLNSDRILDEGVSEIEDLKPLCDGLAKVLTDMMVSSEYVGRPRRTATGIE LVEEPVLDANGNPTGETVAVNPFPEGNRMMVSENHEAKFGQLDAADLGGYEAAVRVLLGQVMAVSALPAHYVGQLSDTPA SADALRAAEASLTARAEARQQQFGRSWEDVARLVVAVRDGVDPLGVDVRVKWADASTRSVAAEADAVTKLFAAGLLPASY ALQRLGYSDDEILEIRAARRAETLDGQGVNLAALPREVA >Mature_439_residues MNDLLQKLLQKLDEPIARYSDLERYYTGTQPLAFLSPEAKEALGTRFGRMASNLPRLAVTSLTERLRVTGFTGADVWDDW LRNDMDQESATAHREALLLGSSYVIVWADRFGRPLVTVESAKQMACVRDPGTRRITAAVKRWETDTTTEAVLYGPEEIVR YRANQTGATVDGFKAVESIANPLGVVPVVRLLNSDRILDEGVSEIEDLKPLCDGLAKVLTDMMVSSEYVGRPRRTATGIE LVEEPVLDANGNPTGETVAVNPFPEGNRMMVSENHEAKFGQLDAADLGGYEAAVRVLLGQVMAVSALPAHYVGQLSDTPA SADALRAAEASLTARAEARQQQFGRSWEDVARLVVAVRDGVDPLGVDVRVKWADASTRSVAAEADAVTKLFAAGLLPASY ALQRLGYSDDEILEIRAARRAETLDGQGVNLAALPREVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47697; Mature: 47697
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLLQKLLQKLDEPIARYSDLERYYTGTQPLAFLSPEAKEALGTRFGRMASNLPRLAVT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHH SLTERLRVTGFTGADVWDDWLRNDMDQESATAHREALLLGSSYVIVWADRFGRPLVTVES HHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHEECCCEEEEEECCCCCCEEEEHH AKQMACVRDPGTRRITAAVKRWETDTTTEAVLYGPEEIVRYRANQTGATVDGFKAVESIA HHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHH NPLGVVPVVRLLNSDRILDEGVSEIEDLKPLCDGLAKVLTDMMVSSEYVGRPRRTATGIE CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LVEEPVLDANGNPTGETVAVNPFPEGNRMMVSENHEAKFGQLDAADLGGYEAAVRVLLGQ HHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHH VMAVSALPAHYVGQLSDTPASADALRAAEASLTARAEARQQQFGRSWEDVARLVVAVRDG HHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC VDPLGVDVRVKWADASTRSVAAEADAVTKLFAAGLLPASYALQRLGYSDDEILEIRAARR CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH AETLDGQGVNLAALPREVA HHCCCCCCCEEECCCCCCC >Mature Secondary Structure MNDLLQKLLQKLDEPIARYSDLERYYTGTQPLAFLSPEAKEALGTRFGRMASNLPRLAVT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHH SLTERLRVTGFTGADVWDDWLRNDMDQESATAHREALLLGSSYVIVWADRFGRPLVTVES HHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHEECCCEEEEEECCCCCCEEEEHH AKQMACVRDPGTRRITAAVKRWETDTTTEAVLYGPEEIVRYRANQTGATVDGFKAVESIA HHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHH NPLGVVPVVRLLNSDRILDEGVSEIEDLKPLCDGLAKVLTDMMVSSEYVGRPRRTATGIE CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LVEEPVLDANGNPTGETVAVNPFPEGNRMMVSENHEAKFGQLDAADLGGYEAAVRVLLGQ HHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHH VMAVSALPAHYVGQLSDTPASADALRAAEASLTARAEARQQQFGRSWEDVARLVVAVRDG HHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC VDPLGVDVRVKWADASTRSVAAEADAVTKLFAAGLLPASYALQRLGYSDDEILEIRAARR CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH AETLDGQGVNLAALPREVA HHCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA