| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799876
Identifier: 108799876
GI number: 108799876
Start: 3069933
End: 3070778
Strand: Reverse
Name: 108799876
Synonym: Mmcs_2910
Alternate gene names: NA
Gene position: 3070778-3069933 (Counterclockwise)
Preceding gene: 108799877
Following gene: 108799875
Centisome position: 53.82
GC content: 67.02
Gene sequence:
>846_bases GTGGCAACCGAAACCACCGCCGCCAATCCCGAACTGCTCCAAGAGCAGGTCGCCAACATCCTCGTACAACCGCTCGAGGC CGCCTCTGTCGTGCTCTCCAGCGGTGTGCGCATCTTCGACACTTCCGGTCCGCTGCGCATCCCCAAGCTGACCGCCGGTG CGTCGGTCGGATTCGTCGCCGAAGGCGGACTGATCCCCGAGGCCGACGTCGACTTCGGCGAAATCTCACTGATGCCCTCG ACTCTCAAGTCGCTTAAGGTGCTCATCCGGTTCACCAACGAACTGCTGCGCCAGTCCGTCATCGGCCTGGACGCCACCCT GCGGCAGCGCCTCGTCACCGACGTGTCCAATGCCCTCGACGACGCTCTGCTCACCGGGGCCGGTACCAGCAACACCATCA CCGGCCTCATCAACCAGACCGGTGTGCAGACCGGCACCCTCGACGTCGCCGACGCCGACAGTCTGCTCGACGCCATCGCG CTCGCCTCGGCCGCCGAGGTCACCCCGAACCGGTGGTTCCTCAACGGCGCGGACTTCATCGCCCTGCGCAAGCTGAAAGA GACGACCGGCTCGGCGAAGTACTTGATCGAGTCCGACGTCACCGCCGGCCCCACCTACCGGCTGTTCGGCATCCCCGTCA CCGTCACCAACAAGCTCGCCGAAGGCAAGGCGGTCCTGGCCGACACCACACAGATCGCCGTCGCCCGCGACCTCGCCCCC TCGGTGAAGCTGCTCGACCAGCGGTACGCCGAATACGACGAGCAGGCCATCCGCGTCGTCACCCGCTACGACCTCGGCCT GCTCCACCCCGAGGCCGTCGTCGTCCTCACCGCAGCGGCCCCGTAG
Upstream 100 bases:
>100_bases CCCACCTGGGGTATCGTGAAGGGGTCGCGCCTGGTGCGCGGCCCCTTCTCCGTCCTGACGACGTGGGTACCGAATCCACT GCAATCGTTAGGACTTCACC
Downstream 100 bases:
>100_bases TGGCGGTCGAAGCTGACCAGGTGGCGGCGTTCCTCGGCAGACCCGAGGACGCCGCCATCCTGGCGACCGCCGAGCAAGCC ATCCCCATCGTCACCACGAT
Product: phage major capsid protein, HK97
Products: NA
Alternate protein names: HK97 Family Phage Capsid Protein; Capsid Protein HK; Phage Capsid Protein HK; Phage Prohead Protease; Phage-Related Protein
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVAEGGLIPEADVDFGEISLMPS TLKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALDDALLTGAGTSNTITGLINQTGVQTGTLDVADADSLLDAIA LASAAEVTPNRWFLNGADFIALRKLKETTGSAKYLIESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLAP SVKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP
Sequences:
>Translated_281_residues MATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVAEGGLIPEADVDFGEISLMPS TLKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALDDALLTGAGTSNTITGLINQTGVQTGTLDVADADSLLDAIA LASAAEVTPNRWFLNGADFIALRKLKETTGSAKYLIESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLAP SVKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP >Mature_280_residues ATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVAEGGLIPEADVDFGEISLMPST LKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALDDALLTGAGTSNTITGLINQTGVQTGTLDVADADSLLDAIAL ASAAEVTPNRWFLNGADFIALRKLKETTGSAKYLIESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLAPS VKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29641; Mature: 29510
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVA CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCEECCEECCCCCCCEEE EGGLIPEADVDFGEISLMPSTLKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALD CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DALLTGAGTSNTITGLINQTGVQTGTLDVADADSLLDAIALASAAEVTPNRWFLNGADFI HHHHCCCCCCCCEEEHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCHH ALRKLKETTGSAKYLIESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLAP HHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEEECHHCCCCEEEECCHHHHHHHHCCH SVKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC >Mature Secondary Structure ATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVA CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCEECCEECCCCCCCEEE EGGLIPEADVDFGEISLMPSTLKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALD CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DALLTGAGTSNTITGLINQTGVQTGTLDVADADSLLDAIALASAAEVTPNRWFLNGADFI HHHHCCCCCCCCEEEHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCHH ALRKLKETTGSAKYLIESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLAP HHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEEECHHCCCCEEEECCHHHHHHHHCCH SVKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA