| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108799867
Identifier: 108799867
GI number: 108799867
Start: 3061970
End: 3062581
Strand: Reverse
Name: 108799867
Synonym: Mmcs_2901
Alternate gene names: NA
Gene position: 3062581-3061970 (Counterclockwise)
Preceding gene: 108799868
Following gene: 108799866
Centisome position: 53.68
GC content: 68.95
Gene sequence:
>612_bases ATGTCTGAGACTCTGGCGACGCTGCCGTCCGCCGTGCGTTCAACCGTCTCCGGGGCGCTCGGCGACCCGCTGCGGCTGTT CGCCGAACCCGGCCCGGTGTACGAGGCCGACGTGGCGTTCGACGACGATGCGCGGATGCCCGGGCTCACGCAGTTGCTGC GGCCCGGCCGGCGGTACACCACCTTCGTGCGGATCGCACCGACGAGTACCGACGCCGTGGTCCGCACCGTGTGCGTCAAA TTCCCCGACGCCTACGGCCCGGGAACCGATCAGGACTTCCTGTTCGCGTCCTCCGGTGACGGCGCGCCGTTGCACCACTT CACCTTTCCCCGAACGCGGGCCGATGACCAGCTCTACTCCTCGCTGTGGCTCTACCTCGCGGGCGTACGTCCCATCGTCT TCGGCGTTTCCGCGGCGGCCGGCTTGCAGACCGGAGTGCTGGGCCGCGGCGACCGGTTGGAATTCCTCATCGGCGGTGTG ATCGGCCGGTTCCACCGGGTGGGTGACATCCAGTTGGGCAGCGAGATCCCGCAGGCGTCGGTCTCTTTCGCGGCGAGCAA CAGCGGGGGAGGACTACGCCCGTTGCCACCGGCGATGTTCTACCGCGGCTGA
Upstream 100 bases:
>100_bases TCCAGATCGTCGCCGCCGGCGAGAGGTCCGGCACGGCGTGGCTGCTCGGTCGCCGGACCGCGTCATGTTGAGATCCGCCG AGCGTGGGTAGTCCGCCGGT
Downstream 100 bases:
>100_bases GCCTCCGCGCGGGGGATGGGGCACGATGTCGTTGATGAGCGCGTTACGTGTATTGACCGGGTTGGGCGTCACCGCCGTGA TGTTGGCGGCGGGATGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSETLATLPSAVRSTVSGALGDPLRLFAEPGPVYEADVAFDDDARMPGLTQLLRPGRRYTTFVRIAPTSTDAVVRTVCVK FPDAYGPGTDQDFLFASSGDGAPLHHFTFPRTRADDQLYSSLWLYLAGVRPIVFGVSAAAGLQTGVLGRGDRLEFLIGGV IGRFHRVGDIQLGSEIPQASVSFAASNSGGGLRPLPPAMFYRG
Sequences:
>Translated_203_residues MSETLATLPSAVRSTVSGALGDPLRLFAEPGPVYEADVAFDDDARMPGLTQLLRPGRRYTTFVRIAPTSTDAVVRTVCVK FPDAYGPGTDQDFLFASSGDGAPLHHFTFPRTRADDQLYSSLWLYLAGVRPIVFGVSAAAGLQTGVLGRGDRLEFLIGGV IGRFHRVGDIQLGSEIPQASVSFAASNSGGGLRPLPPAMFYRG >Mature_202_residues SETLATLPSAVRSTVSGALGDPLRLFAEPGPVYEADVAFDDDARMPGLTQLLRPGRRYTTFVRIAPTSTDAVVRTVCVKF PDAYGPGTDQDFLFASSGDGAPLHHFTFPRTRADDQLYSSLWLYLAGVRPIVFGVSAAAGLQTGVLGRGDRLEFLIGGVI GRFHRVGDIQLGSEIPQASVSFAASNSGGGLRPLPPAMFYRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21606; Mature: 21475
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETLATLPSAVRSTVSGALGDPLRLFAEPGPVYEADVAFDDDARMPGLTQLLRPGRRYT CCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEECEEECCCCCCCCHHHHHCCCCCEE TFVRIAPTSTDAVVRTVCVKFPDAYGPGTDQDFLFASSGDGAPLHHFTFPRTRADDQLYS EEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCHHHHHH SLWLYLAGVRPIVFGVSAAAGLQTGVLGRGDRLEFLIGGVIGRFHRVGDIQLGSEIPQAS HHHHHHHCCHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCC VSFAASNSGGGLRPLPPAMFYRG EEEEECCCCCCCCCCCHHHCCCC >Mature Secondary Structure SETLATLPSAVRSTVSGALGDPLRLFAEPGPVYEADVAFDDDARMPGLTQLLRPGRRYT CCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEECEEECCCCCCCCHHHHHCCCCCEE TFVRIAPTSTDAVVRTVCVKFPDAYGPGTDQDFLFASSGDGAPLHHFTFPRTRADDQLYS EEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCHHHHHH SLWLYLAGVRPIVFGVSAAAGLQTGVLGRGDRLEFLIGGVIGRFHRVGDIQLGSEIPQAS HHHHHHHCCHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCC VSFAASNSGGGLRPLPPAMFYRG EEEEECCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA