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The map label for this gene is 108799809

Identifier: 108799809

GI number: 108799809

Start: 3008938

End: 3009696

Strand: Reverse

Name: 108799809

Synonym: Mmcs_2843

Alternate gene names: NA

Gene position: 3009696-3008938 (Counterclockwise)

Preceding gene: 108799810

Following gene: 108799808

Centisome position: 52.75

GC content: 70.09

Gene sequence:

>759_bases
ATGAGCCAGCCCGACAGCGCGCCACTCGCCGGGATGTCCATCGGGGCGGTCCTGGACCTGCTCCGCCCGGATTTTCCGGA
CGTGACGATCTCCAAGATCCGGTTCCTGGAGGCCGAAGGTCTGGTCACACCGGAGCGCACCGCGTCGGGCTACCGCCGGT
TCACCGCGTATGACTGCGCGCGCCTGCGGTTCATCCTCACCGCGCAGCGGGATCAGTATCTGCCGCTCAAGGTCATCAAG
GCCCAACTCGACGCTCAACCCGACGGCGCCCTGCCACCTTCTGCCCAGCCGTATTCGACGCCCTATCCGGCGCCGCGGTT
GGTGCCGGTCGGCACCGGCGACGGCGCGGCCGCGGCGGCGGGTGTGGGGCCGACGCAGGTCCGGCTCAGCCGCGAGGATC
TGCTCGAACGATCCGGTGTGGGCGACGACCTGCTGGCCGCGCTGGTGAAGGCGGGGGTGATCACCCCTTCTGCCAAGGCC
GGCGGCGGGATCTTCTTCGACGAGCACTCCGTGGTGATCGCGCAGTGCGCGGGCGCGCTCGCCGACTACGGCGTCGAACC
CAGGCATCTGCGCGCATTCCGCTCCGCGGCCGACCGGCAGTCCGATCTCATCGCCCAGATCGCCGGTCCGGTGGGTAAGG
CCGGCACCACCGGCGCCCGCGACCGGGCCGACGACCTCGCCCGTGAAGTGGCGGCCCTGGCCATCACCCTGCATACGTCG
TTGATCAAATCGGCCGTACGCGACGTACTGGATCGCTGA

Upstream 100 bases:

>100_bases
GGTGCAGATCGGCAAATTCCGTCTGGTCTTCCTGACGGGCCCCAGCACCGAGAACGGCCCGAGCAGCTAGGTGGCCGATG
AGCGCTCGCGCGAAGAGTAA

Downstream 100 bases:

>100_bases
GGATTAGACTCGCAACGACGGATTCGTTCGTCACGTCAGGGCACCGCATCTGACACGCAGCACCGAAGAACGACAAGCAC
ACTGGTGCGAAAGGGCAGAC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSQPDSAPLAGMSIGAVLDLLRPDFPDVTISKIRFLEAEGLVTPERTASGYRRFTAYDCARLRFILTAQRDQYLPLKVIK
AQLDAQPDGALPPSAQPYSTPYPAPRLVPVGTGDGAAAAAGVGPTQVRLSREDLLERSGVGDDLLAALVKAGVITPSAKA
GGGIFFDEHSVVIAQCAGALADYGVEPRHLRAFRSAADRQSDLIAQIAGPVGKAGTTGARDRADDLAREVAALAITLHTS
LIKSAVRDVLDR

Sequences:

>Translated_252_residues
MSQPDSAPLAGMSIGAVLDLLRPDFPDVTISKIRFLEAEGLVTPERTASGYRRFTAYDCARLRFILTAQRDQYLPLKVIK
AQLDAQPDGALPPSAQPYSTPYPAPRLVPVGTGDGAAAAAGVGPTQVRLSREDLLERSGVGDDLLAALVKAGVITPSAKA
GGGIFFDEHSVVIAQCAGALADYGVEPRHLRAFRSAADRQSDLIAQIAGPVGKAGTTGARDRADDLAREVAALAITLHTS
LIKSAVRDVLDR
>Mature_251_residues
SQPDSAPLAGMSIGAVLDLLRPDFPDVTISKIRFLEAEGLVTPERTASGYRRFTAYDCARLRFILTAQRDQYLPLKVIKA
QLDAQPDGALPPSAQPYSTPYPAPRLVPVGTGDGAAAAAGVGPTQVRLSREDLLERSGVGDDLLAALVKAGVITPSAKAG
GGIFFDEHSVVIAQCAGALADYGVEPRHLRAFRSAADRQSDLIAQIAGPVGKAGTTGARDRADDLAREVAALAITLHTSL
IKSAVRDVLDR

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 26480; Mature: 26349

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPDSAPLAGMSIGAVLDLLRPDFPDVTISKIRFLEAEGLVTPERTASGYRRFTAYDCA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RLRFILTAQRDQYLPLKVIKAQLDAQPDGALPPSAQPYSTPYPAPRLVPVGTGDGAAAAA
HHHHEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHC
GVGPTQVRLSREDLLERSGVGDDLLAALVKAGVITPSAKAGGGIFFDEHSVVIAQCAGAL
CCCHHHEEECHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHH
ADYGVEPRHLRAFRSAADRQSDLIAQIAGPVGKAGTTGARDRADDLAREVAALAITLHTS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LIKSAVRDVLDR
HHHHHHHHHHCC
>Mature Secondary Structure 
SQPDSAPLAGMSIGAVLDLLRPDFPDVTISKIRFLEAEGLVTPERTASGYRRFTAYDCA
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RLRFILTAQRDQYLPLKVIKAQLDAQPDGALPPSAQPYSTPYPAPRLVPVGTGDGAAAAA
HHHHEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHC
GVGPTQVRLSREDLLERSGVGDDLLAALVKAGVITPSAKAGGGIFFDEHSVVIAQCAGAL
CCCHHHEEECHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHH
ADYGVEPRHLRAFRSAADRQSDLIAQIAGPVGKAGTTGARDRADDLAREVAALAITLHTS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LIKSAVRDVLDR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]