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The map label for this gene is 108799807

Identifier: 108799807

GI number: 108799807

Start: 3007490

End: 3008110

Strand: Reverse

Name: 108799807

Synonym: Mmcs_2841

Alternate gene names: NA

Gene position: 3008110-3007490 (Counterclockwise)

Preceding gene: 108799808

Following gene: 108799806

Centisome position: 52.72

GC content: 69.57

Gene sequence:

>621_bases
GTGGGCGACACGCCACGTCAGGGAGAGCTGGATCTGTCGACCGAGAACACCCCTGAGCCGGCGGCCCGGGTGCCGAGCGA
ACCCGTTCAGGCCGGTCTGTTCCCCGACGACTCCGTCCCTGACGAGCTCGTGGGCTACCGCGGGCCGAGCGCCTGCCAGA
TCGCCGGCATCACCTACCGGCAGCTGGACTACTGGGCCCGCACCTCGCTGGTGGTGCCCTCGATCCGCGGTGCGGCGGGA
TCCGGCAGCCAGCGGCTCTACTCCTTCAAGGACATCCTCGTCCTCAAGATCGTCAAACGGCTGCTCGACACCGGCATCTC
CCTGCACAACATCCGCGTCGCGGTGGACCATCTGCGCCAGCGCGGTGTCAGTGACCTCGCGAACATCACGTTGTTCTCCG
ACGGCACCACGGTGTACGAGTGCACCTCCGCCGAGGAGGTCGTCGACCTGCTGCAGGGCGGCCAGGGCGTCTTCGGTATC
GCGGTCTCGGGTGCGATGCGCGAGCTGACCGGCGCGATCGCCGACTTCCCGGGCGAGCGGGCCGACGGCGGCGAGTCCAT
CGCCGCGCCCGAGGACGAACTCGCCTCCCGGCGCAAGCACCGCGACCGCAAGATCGGCTGA

Upstream 100 bases:

>100_bases
GCGTATGCTCGGACACAATCGGGCTGGCGGACGAAGACACTGAACTGCACGTCGCTGCAGGGTGCTAGCGGGCGAGTTCG
ATCGGCGAGAGGATCAGATA

Downstream 100 bases:

>100_bases
TTCGAAACCGCTGTCCCGCACCGTCTTTGGTGACACAACGGCCCCGTGATGTGACCTGACACACACATCGGCCTGGTCGC
GATTCTCCTGCACGGGTGCG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MGDTPRQGELDLSTENTPEPAARVPSEPVQAGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWARTSLVVPSIRGAAG
SGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVSDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGI
AVSGAMRELTGAIADFPGERADGGESIAAPEDELASRRKHRDRKIG

Sequences:

>Translated_206_residues
MGDTPRQGELDLSTENTPEPAARVPSEPVQAGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWARTSLVVPSIRGAAG
SGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVSDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGI
AVSGAMRELTGAIADFPGERADGGESIAAPEDELASRRKHRDRKIG
>Mature_205_residues
GDTPRQGELDLSTENTPEPAARVPSEPVQAGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWARTSLVVPSIRGAAGS
GSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVSDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIA
VSGAMRELTGAIADFPGERADGGESIAAPEDELASRRKHRDRKIG

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22093; Mature: 21962

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDTPRQGELDLSTENTPEPAARVPSEPVQAGLFPDDSVPDELVGYRGPSACQIAGITYR
CCCCCCCCCEECCCCCCCCHHHHCCCCCHHCCCCCCCCCCHHHHCCCCCCCEEEECCHHH
QLDYWARTSLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQ
HHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RGVSDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRELTGAIADFPGER
CCHHHHHCEEEEECCCEEEEECCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCC
ADGGESIAAPEDELASRRKHRDRKIG
CCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GDTPRQGELDLSTENTPEPAARVPSEPVQAGLFPDDSVPDELVGYRGPSACQIAGITYR
CCCCCCCCEECCCCCCCCHHHHCCCCCHHCCCCCCCCCCHHHHCCCCCCCEEEECCHHH
QLDYWARTSLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQ
HHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RGVSDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRELTGAIADFPGER
CCHHHHHCEEEEECCCEEEEECCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCC
ADGGESIAAPEDELASRRKHRDRKIG
CCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]