| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799653
Identifier: 108799653
GI number: 108799653
Start: 2839464
End: 2840267
Strand: Reverse
Name: 108799653
Synonym: Mmcs_2687
Alternate gene names: NA
Gene position: 2840267-2839464 (Counterclockwise)
Preceding gene: 108799658
Following gene: 108799652
Centisome position: 49.78
GC content: 71.02
Gene sequence:
>804_bases GTGACCGCGGTACCGTCGGCACCGGTCATGGTGGTGTCACTCATCCGAATCCGGCGCAGCATCGGCCGGCGCCCCGCGAC GGCGCTGGCCGTGGCCGCCGCTGCCATCGCGCTCGTCGGATGCGGGGCCGACGCGCCGCCGCAGGCCCCGCCTTCCCCGT CGTCCTCCACATCCCAGAAGTCCACCGCGACACGCCCGAGCGCCACCAGGACGCCCACCAGTACGAGGACGACCTCTGCG GCGCCGCAACCCGCTGCGGTCACCCCGGTCACCGCCGCCGACCTGGGGTCGACCTGGCGACCGGGCTGCCCCCTCGGCCC CGAACGTCTCCGGCGCGTCGAACTCGACCACCTCGGTTTCGACGGTCGGACCCACCGTGGTGCACTCGTCGTCCACGAGG ACCTGGTGGCGCAGGTCATCGAGGTGTTCGGCCAACTGCAGCGGCTGGGCTATCCCATCGCGAAGATGCGCACCGTCGAC GCGTACCCGGGCGCCGATGACGAACTGTCGATGCGGGACAACAACACCTCGGCCTTCAACTGCCGGGGGATCCCGGGGTC GCAGGCCTGGTCCTACCATGCCTACGGTCGCGCGATCGACCTCAACCCGCTGCTCAACCCCTACATCGGTGGCAGTGGTG CGGTGGAACCGGCCAACGCCGGCCCCTACGTCGACCGCACCCGCACCGATCCCGGCATCCTGCACGCCGGTGACCCGGCC GTACTCGTGTTCACCGACCGCGGATGGCGCTGGGGTGGGGACTGGCGGACACCGAAGGACTACCAGCACTTCGAGCTGCG GTGA
Upstream 100 bases:
>100_bases ACCGCGGCCGCGCTGACCTCTTCTTCAGTGATAGCCCCCTGACAATACCGAAGGTCTTGCCCGGCGGCGTCGATCCGGCT GTCCGGGGCCGGCAGCCGCG
Downstream 100 bases:
>100_bases ATGGCCCAGTGGCCGAGTTGGCAGCAGTGCCACAGGTTTCGGACGCGCACCGGGCTCCGGCTCGCTGATACCCTGCCTAA CGCTGCCCGTTGAGCGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Ig Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTAVPSAPVMVVSLIRIRRSIGRRPATALAVAAAAIALVGCGADAPPQAPPSPSSSTSQKSTATRPSATRTPTSTRTTSA APQPAAVTPVTAADLGSTWRPGCPLGPERLRRVELDHLGFDGRTHRGALVVHEDLVAQVIEVFGQLQRLGYPIAKMRTVD AYPGADDELSMRDNNTSAFNCRGIPGSQAWSYHAYGRAIDLNPLLNPYIGGSGAVEPANAGPYVDRTRTDPGILHAGDPA VLVFTDRGWRWGGDWRTPKDYQHFELR
Sequences:
>Translated_267_residues MTAVPSAPVMVVSLIRIRRSIGRRPATALAVAAAAIALVGCGADAPPQAPPSPSSSTSQKSTATRPSATRTPTSTRTTSA APQPAAVTPVTAADLGSTWRPGCPLGPERLRRVELDHLGFDGRTHRGALVVHEDLVAQVIEVFGQLQRLGYPIAKMRTVD AYPGADDELSMRDNNTSAFNCRGIPGSQAWSYHAYGRAIDLNPLLNPYIGGSGAVEPANAGPYVDRTRTDPGILHAGDPA VLVFTDRGWRWGGDWRTPKDYQHFELR >Mature_266_residues TAVPSAPVMVVSLIRIRRSIGRRPATALAVAAAAIALVGCGADAPPQAPPSPSSSTSQKSTATRPSATRTPTSTRTTSAA PQPAAVTPVTAADLGSTWRPGCPLGPERLRRVELDHLGFDGRTHRGALVVHEDLVAQVIEVFGQLQRLGYPIAKMRTVDA YPGADDELSMRDNNTSAFNCRGIPGSQAWSYHAYGRAIDLNPLLNPYIGGSGAVEPANAGPYVDRTRTDPGILHAGDPAV LVFTDRGWRWGGDWRTPKDYQHFELR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28466; Mature: 28335
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVPSAPVMVVSLIRIRRSIGRRPATALAVAAAAIALVGCGADAPPQAPPSPSSSTSQK CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC STATRPSATRTPTSTRTTSAAPQPAAVTPVTAADLGSTWRPGCPLGPERLRRVELDHLGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC DGRTHRGALVVHEDLVAQVIEVFGQLQRLGYPIAKMRTVDAYPGADDELSMRDNNTSAFN CCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCEEECCCCCCEEE CRGIPGSQAWSYHAYGRAIDLNPLLNPYIGGSGAVEPANAGPYVDRTRTDPGILHAGDPA ECCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCE VLVFTDRGWRWGGDWRTPKDYQHFELR EEEEECCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure TAVPSAPVMVVSLIRIRRSIGRRPATALAVAAAAIALVGCGADAPPQAPPSPSSSTSQK CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC STATRPSATRTPTSTRTTSAAPQPAAVTPVTAADLGSTWRPGCPLGPERLRRVELDHLGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC DGRTHRGALVVHEDLVAQVIEVFGQLQRLGYPIAKMRTVDAYPGADDELSMRDNNTSAFN CCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCEEECCCCCCEEE CRGIPGSQAWSYHAYGRAIDLNPLLNPYIGGSGAVEPANAGPYVDRTRTDPGILHAGDPA ECCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCE VLVFTDRGWRWGGDWRTPKDYQHFELR EEEEECCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA