| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799651
Identifier: 108799651
GI number: 108799651
Start: 2837273
End: 2837965
Strand: Reverse
Name: 108799651
Synonym: Mmcs_2685
Alternate gene names: NA
Gene position: 2837965-2837273 (Counterclockwise)
Preceding gene: 108799652
Following gene: 108799647
Centisome position: 49.74
GC content: 70.56
Gene sequence:
>693_bases GTGAGTCGCCTGGTCACGTTGGTGCTGTCTGTTGCGCTGCTGGTCGGCCTGGTGGTCGCCCGCCCGCAGCCGGTACGCGA CGACGAGATGGTGACGCTGCAGTTCGCCGGCAGTCGCGTCGCCGTCGTCGGCGACTCGTACACCACCGGCAGTAACGAGG GTGGCGAAGGCGCCAAGGGCTGGACGACGCGGGCATGGCAGTTGTTGGCCGCCCAGGGCCTTCCGGTGCGCGCCGACGTC GCTGCCGAGGGCGGTGCCGGGTACGGGACCCGCGGCAACCGCGGCAGTGTCTTCGAGGACCTCACCGCCCGAGCGGTGAA GGCCGACGACCACCTCGTGGTGTTCTACGGGTCGCGCAACGACGAGAGGGTCGAGCCCACCCTGTTCACGATCATGGTCT ACGGCGTGTTCCAACTCGCCCGCCGTACCGCTCCGGAAGCCCGGCTCCTGGTGATCGGCCCACCGTGGCCGACCGCCGAT CCGCCGCCGGCGATCCTCCGGATCCGAGACACCCTGCGGTATCAGTCGGGCCTGGCCAACGCCACGTTCGTCGACCCGAT CGCGGAGCGCTGGTTCGTCGACGCCCCCGGGCTCATCGGCGCCGACGGCGTCCACCCCACCGACGCCGGGCACGTGTACA TGGCCGACAAGATCGCGCCGTTGATCGCCACCCAGCTGACCCGACGGGTCTGA
Upstream 100 bases:
>100_bases CCGCGAGCGAGTCGCGGAAGGCCGGCAGCTTCGCCGACACTTACCCTTTCAGTCATCGTGAGGTGCGGCGTCTCGGTGCC GTCGATTGTGGAGGTAAGCG
Downstream 100 bases:
>100_bases GGCCGGATTCAGTCCTGAACAGCCTTGGCCACCGCGACGCACACGGTGAGCCAGCGCGGGTCGGGATGTGTCGCCTGCTG CAGTTCCCACACCGCGTTGT
Product: G-D-S-L family lipolytic protein
Products: NA
Alternate protein names: Lipolytic Protein G-D-S-L Family
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSRLVTLVLSVALLVGLVVARPQPVRDDEMVTLQFAGSRVAVVGDSYTTGSNEGGEGAKGWTTRAWQLLAAQGLPVRADV AAEGGAGYGTRGNRGSVFEDLTARAVKADDHLVVFYGSRNDERVEPTLFTIMVYGVFQLARRTAPEARLLVIGPPWPTAD PPPAILRIRDTLRYQSGLANATFVDPIAERWFVDAPGLIGADGVHPTDAGHVYMADKIAPLIATQLTRRV
Sequences:
>Translated_230_residues MSRLVTLVLSVALLVGLVVARPQPVRDDEMVTLQFAGSRVAVVGDSYTTGSNEGGEGAKGWTTRAWQLLAAQGLPVRADV AAEGGAGYGTRGNRGSVFEDLTARAVKADDHLVVFYGSRNDERVEPTLFTIMVYGVFQLARRTAPEARLLVIGPPWPTAD PPPAILRIRDTLRYQSGLANATFVDPIAERWFVDAPGLIGADGVHPTDAGHVYMADKIAPLIATQLTRRV >Mature_229_residues SRLVTLVLSVALLVGLVVARPQPVRDDEMVTLQFAGSRVAVVGDSYTTGSNEGGEGAKGWTTRAWQLLAAQGLPVRADVA AEGGAGYGTRGNRGSVFEDLTARAVKADDHLVVFYGSRNDERVEPTLFTIMVYGVFQLARRTAPEARLLVIGPPWPTADP PPAILRIRDTLRYQSGLANATFVDPIAERWFVDAPGLIGADGVHPTDAGHVYMADKIAPLIATQLTRRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24676; Mature: 24545
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLVTLVLSVALLVGLVVARPQPVRDDEMVTLQFAGSRVAVVGDSYTTGSNEGGEGAKG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCC WTTRAWQLLAAQGLPVRADVAAEGGAGYGTRGNRGSVFEDLTARAVKADDHLVVFYGSRN HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHEECCCCEEEEECCCC DERVEPTLFTIMVYGVFQLARRTAPEARLLVIGPPWPTADPPPAILRIRDTLRYQSGLAN CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC ATFVDPIAERWFVDAPGLIGADGVHPTDAGHVYMADKIAPLIATQLTRRV CCCHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure SRLVTLVLSVALLVGLVVARPQPVRDDEMVTLQFAGSRVAVVGDSYTTGSNEGGEGAKG HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCC WTTRAWQLLAAQGLPVRADVAAEGGAGYGTRGNRGSVFEDLTARAVKADDHLVVFYGSRN HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHEECCCCEEEEECCCC DERVEPTLFTIMVYGVFQLARRTAPEARLLVIGPPWPTADPPPAILRIRDTLRYQSGLAN CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC ATFVDPIAERWFVDAPGLIGADGVHPTDAGHVYMADKIAPLIATQLTRRV CCCHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA