| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799635
Identifier: 108799635
GI number: 108799635
Start: 2818884
End: 2820134
Strand: Reverse
Name: 108799635
Synonym: Mmcs_2668
Alternate gene names: NA
Gene position: 2820134-2818884 (Counterclockwise)
Preceding gene: 108799636
Following gene: 108799634
Centisome position: 49.43
GC content: 69.22
Gene sequence:
>1251_bases GTGACCGCGCGAGTCGCTCGCCCCGCGCCGATCGCCTTCGACGACCTCGCCGCCCCTGTCTACCCCGAGGCGGCCCGGCC GCTGCGCGACGGATTGGCCGCCTACGGCGCCACCCTGGACCTGTCGCCGCAGGCGCTGATGTCCACGGCTGTGGACCGAG CGGGTCTGACCGACTTCGGTGAGGACGGCTTCCGCGACCGGCTCGGGGTGCTGTGCGATGCGCTCGACACCGAGGCCGCG CTGTCGGACGCCGGCCGGGCGGTGGCGTTCGAGCAGTTGACCCAGCACCTGGTGAACCGGTTACGGCTGCAGGATCTGAT CACCCGTCACCCCGAGATTCTGACCGTTCCCATCGAGCGTCCGATCATCATCTGCGGGCTGCCCCGCACCGGCACCACCC ACCTGCACAACATGATCGCGGCCGATCCCGCGATCCGGTACCTGCCGTACTGGGAGAGCCTCGAACCCGTGCCCGCACCG GGGGAGGACGACCCGCAGGGCCGGCGGGAGCGGTGCGCGGCCGGCCTGGACCTGGTCCACACGGTGATGCCGGAGTTCAG GCGGATGCACGACATGACCGTCGACCACGCTCACGAAGAGATTCAGCTGCTGGCCAACGACATCGGCGGGATGTTGTTCG AGACGACCTTCCACGTACCGCGCTTCGCCGACCACTACAAGGCCCATGACCAGTCGGCGTCCTACGCCTACCTCAAGCGG ACCCTGCAGGCCCTGCAGTGGCAGGGCGGTGGAACCCGGTGGGTGCTCAAGTCCCCACAGCACCTCGAACAGTTCCCGGC ACTGGCGTCGACGTTCCCGGACGCGACTTTCGTTCTCACCCACCGCAACCCGGCGGAGGTCATCCAGTCGATGGCGACGA TGATCAGCTACGCGGCACGGATGTCGTGTGAGCACCCGGACCCCATTGAGCGCACCCGCTACTGGGTCGAGCGTTCCGCC GATCTGCTCACCGCGTGCGTGCGCGACCGCGACGTGCTACCCGCCGACCGGTCCATCGACATCCGCTTCGAGGATTTCAT GGCCGACGAGGAGGCCACGCTGGCCGCGATCTACGCGGTGGCCGGCCAGCCGTTCGACGATCGCGCCCGCAGCGCAATGG CCGAGTTCCGGGCCGATCACCCCCGCGGTAGGCACGGCGGCGTGATCCACCGCCCGGCCGACCTCGGGCTCGACGTCGAT CAGGTGGCCGCCCGGCTGAGCGATTACCAGCGGCGTTTCGTCGCTTCCTGA
Upstream 100 bases:
>100_bases CGGGCCGGCGCACGGGGCTGATCTGGCTGCGCTGGTTCCTGCCCGAGGCCACGCCCGCGCGGCCGCAGTGCCGGGTCGTC GACCTCGCGGAGGTCTCCCG
Downstream 100 bases:
>100_bases CGCGAGGAGTCGACCGGGCTCCTGCGGGTACCCTCGCGCCATGGAGGACATGCGATGAGCGCGGGCCTGTTCGGACTTCT CGACGATGTTGCCGCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MTARVARPAPIAFDDLAAPVYPEAARPLRDGLAAYGATLDLSPQALMSTAVDRAGLTDFGEDGFRDRLGVLCDALDTEAA LSDAGRAVAFEQLTQHLVNRLRLQDLITRHPEILTVPIERPIIICGLPRTGTTHLHNMIAADPAIRYLPYWESLEPVPAP GEDDPQGRRERCAAGLDLVHTVMPEFRRMHDMTVDHAHEEIQLLANDIGGMLFETTFHVPRFADHYKAHDQSASYAYLKR TLQALQWQGGGTRWVLKSPQHLEQFPALASTFPDATFVLTHRNPAEVIQSMATMISYAARMSCEHPDPIERTRYWVERSA DLLTACVRDRDVLPADRSIDIRFEDFMADEEATLAAIYAVAGQPFDDRARSAMAEFRADHPRGRHGGVIHRPADLGLDVD QVAARLSDYQRRFVAS
Sequences:
>Translated_416_residues MTARVARPAPIAFDDLAAPVYPEAARPLRDGLAAYGATLDLSPQALMSTAVDRAGLTDFGEDGFRDRLGVLCDALDTEAA LSDAGRAVAFEQLTQHLVNRLRLQDLITRHPEILTVPIERPIIICGLPRTGTTHLHNMIAADPAIRYLPYWESLEPVPAP GEDDPQGRRERCAAGLDLVHTVMPEFRRMHDMTVDHAHEEIQLLANDIGGMLFETTFHVPRFADHYKAHDQSASYAYLKR TLQALQWQGGGTRWVLKSPQHLEQFPALASTFPDATFVLTHRNPAEVIQSMATMISYAARMSCEHPDPIERTRYWVERSA DLLTACVRDRDVLPADRSIDIRFEDFMADEEATLAAIYAVAGQPFDDRARSAMAEFRADHPRGRHGGVIHRPADLGLDVD QVAARLSDYQRRFVAS >Mature_415_residues TARVARPAPIAFDDLAAPVYPEAARPLRDGLAAYGATLDLSPQALMSTAVDRAGLTDFGEDGFRDRLGVLCDALDTEAAL SDAGRAVAFEQLTQHLVNRLRLQDLITRHPEILTVPIERPIIICGLPRTGTTHLHNMIAADPAIRYLPYWESLEPVPAPG EDDPQGRRERCAAGLDLVHTVMPEFRRMHDMTVDHAHEEIQLLANDIGGMLFETTFHVPRFADHYKAHDQSASYAYLKRT LQALQWQGGGTRWVLKSPQHLEQFPALASTFPDATFVLTHRNPAEVIQSMATMISYAARMSCEHPDPIERTRYWVERSAD LLTACVRDRDVLPADRSIDIRFEDFMADEEATLAAIYAVAGQPFDDRARSAMAEFRADHPRGRHGGVIHRPADLGLDVDQ VAARLSDYQRRFVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46390; Mature: 46259
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARVARPAPIAFDDLAAPVYPEAARPLRDGLAAYGATLDLSPQALMSTAVDRAGLTDFG CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC EDGFRDRLGVLCDALDTEAALSDAGRAVAFEQLTQHLVNRLRLQDLITRHPEILTVPIER CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PIIICGLPRTGTTHLHNMIAADPAIRYLPYWESLEPVPAPGEDDPQGRRERCAAGLDLVH CEEEEECCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TVMPEFRRMHDMTVDHAHEEIQLLANDIGGMLFETTFHVPRFADHYKAHDQSASYAYLKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH TLQALQWQGGGTRWVLKSPQHLEQFPALASTFPDATFVLTHRNPAEVIQSMATMISYAAR HHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH MSCEHPDPIERTRYWVERSADLLTACVRDRDVLPADRSIDIRFEDFMADEEATLAAIYAV HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHH AGQPFDDRARSAMAEFRADHPRGRHGGVIHRPADLGLDVDQVAARLSDYQRRFVAS HCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TARVARPAPIAFDDLAAPVYPEAARPLRDGLAAYGATLDLSPQALMSTAVDRAGLTDFG CCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC EDGFRDRLGVLCDALDTEAALSDAGRAVAFEQLTQHLVNRLRLQDLITRHPEILTVPIER CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PIIICGLPRTGTTHLHNMIAADPAIRYLPYWESLEPVPAPGEDDPQGRRERCAAGLDLVH CEEEEECCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TVMPEFRRMHDMTVDHAHEEIQLLANDIGGMLFETTFHVPRFADHYKAHDQSASYAYLKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH TLQALQWQGGGTRWVLKSPQHLEQFPALASTFPDATFVLTHRNPAEVIQSMATMISYAAR HHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH MSCEHPDPIERTRYWVERSADLLTACVRDRDVLPADRSIDIRFEDFMADEEATLAAIYAV HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHH AGQPFDDRARSAMAEFRADHPRGRHGGVIHRPADLGLDVDQVAARLSDYQRRFVAS HCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA