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The map label for this gene is xerC [H]

Identifier: 108799567

GI number: 108799567

Start: 2758853

End: 2759974

Strand: Reverse

Name: xerC [H]

Synonym: Mmcs_2600

Alternate gene names: 108799567

Gene position: 2759974-2758853 (Counterclockwise)

Preceding gene: 108799568

Following gene: 108799566

Centisome position: 48.37

GC content: 59.8

Gene sequence:

>1122_bases
ATGGCCGCTGAGGAGCTCCCGGGCTTCGTCCCTAGGATTCTGCGTGCCGACGATGTTTCGCTGCTTCGAGCAGACGAGAC
CGTCTTCGACGCAATGCTTGATGGCTGGCGAGCTCAGATGCTGGCTCGTGGCCTCGAGATCGACACGATCAAAGCACGGT
GCCGTGTGATCGCCCGATTCGTCGAATTCACCAACGAGTACCCATGGCGCTGGCGAGCGAACGACGTGGATCAGTTCCTC
GCTGAACTACGGTCGCAGGCGACACCGATCGCTCTGTCGACTCTGCGCTCGTACAGTAACGCGATATCGATGTTCTGTAG
TTATGTCAGTGACAGTCGATATGGATGGGTTGACTTCTGCGAGAGGCAATTTCGTGATGTTCCGTCGCAGATCGTCTTTG
AATGGAACACGCCGCAGCACACCACGGACGACGCGGTTCCACCGGGACGCCGTGCATTCACAAAGGCTGAACTGCAGCAC
CTGTTCGACGTCGTGGATGACTTCGTCGATGACGCCCACAGGAAGGGGTCCAAACGCTGGCTTACGGCGCTGCGTGACTC
GACAGCATTCAAGATCGGATACGCGTTTGGACTGCGCCGACGAGAACTGGTCATGCTCGACCTGACCGACTTTGGACCAA
ACCCGCACGTTCCCCGCTATGGCAATTTCGGTGCGATGACCGTTCGCTGGGCCAAGGGCACCAAGGGGTCGGGGCCACGC
CGGCGGACAGTTCTGACGTCGCCCGAATTTCCCTGGGTGGTAGACCTTTTGCAGTACTGGTGCTTCGAGGGCCGGGAGCT
GTTCGCGACCGCGGACCGCTCCCCTGCCCTCTGGCCTAGCGAACGCGGAGACAGGCTCACCTTGGGTGCACTCGGACGTT
CCTTCACGGCGTTCCGGCGGCTTGCCGGACTTCCCCCGGAACTGAGCTTGCACGCGTTGCGCCACTCTTACACTACGCAC
CTTCTGGAAGCCGGTTACGACCCGTTGTTCGTGCAGCAGCAGCTCGGGCACTCGTATGCCTCGACAACGTCGCTGTACAC
CTCGGTTTCGTCGGATTTCAAACAGAAGGTGATCCAGCAGATGATTACCCGTCGCCTCCAGATGGGTGAAACCAATGGCT
GA

Upstream 100 bases:

>100_bases
TTATGTCCCGCTGGGTCATTGCCCATCCACCGTCCGACTCCCAGGTCAACGTCCCGGATGGCATCCACGTGGTTGAGCCG
ACTGTCAGACGGGGTTAGCG

Downstream 100 bases:

>100_bases
GCAACGGCGTATCGGCTTTCACTGGCATCTCAGGCGCGTCATGGCAGCGCACAACCTCTGGAAATCGACCGAGCTGCGCC
CACTCCTGCGATCACGTGGA

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MAAEELPGFVPRILRADDVSLLRADETVFDAMLDGWRAQMLARGLEIDTIKARCRVIARFVEFTNEYPWRWRANDVDQFL
AELRSQATPIALSTLRSYSNAISMFCSYVSDSRYGWVDFCERQFRDVPSQIVFEWNTPQHTTDDAVPPGRRAFTKAELQH
LFDVVDDFVDDAHRKGSKRWLTALRDSTAFKIGYAFGLRRRELVMLDLTDFGPNPHVPRYGNFGAMTVRWAKGTKGSGPR
RRTVLTSPEFPWVVDLLQYWCFEGRELFATADRSPALWPSERGDRLTLGALGRSFTAFRRLAGLPPELSLHALRHSYTTH
LLEAGYDPLFVQQQLGHSYASTTSLYTSVSSDFKQKVIQQMITRRLQMGETNG

Sequences:

>Translated_373_residues
MAAEELPGFVPRILRADDVSLLRADETVFDAMLDGWRAQMLARGLEIDTIKARCRVIARFVEFTNEYPWRWRANDVDQFL
AELRSQATPIALSTLRSYSNAISMFCSYVSDSRYGWVDFCERQFRDVPSQIVFEWNTPQHTTDDAVPPGRRAFTKAELQH
LFDVVDDFVDDAHRKGSKRWLTALRDSTAFKIGYAFGLRRRELVMLDLTDFGPNPHVPRYGNFGAMTVRWAKGTKGSGPR
RRTVLTSPEFPWVVDLLQYWCFEGRELFATADRSPALWPSERGDRLTLGALGRSFTAFRRLAGLPPELSLHALRHSYTTH
LLEAGYDPLFVQQQLGHSYASTTSLYTSVSSDFKQKVIQQMITRRLQMGETNG
>Mature_372_residues
AAEELPGFVPRILRADDVSLLRADETVFDAMLDGWRAQMLARGLEIDTIKARCRVIARFVEFTNEYPWRWRANDVDQFLA
ELRSQATPIALSTLRSYSNAISMFCSYVSDSRYGWVDFCERQFRDVPSQIVFEWNTPQHTTDDAVPPGRRAFTKAELQHL
FDVVDDFVDDAHRKGSKRWLTALRDSTAFKIGYAFGLRRRELVMLDLTDFGPNPHVPRYGNFGAMTVRWAKGTKGSGPRR
RTVLTSPEFPWVVDLLQYWCFEGRELFATADRSPALWPSERGDRLTLGALGRSFTAFRRLAGLPPELSLHALRHSYTTHL
LEAGYDPLFVQQQLGHSYASTTSLYTSVSSDFKQKVIQQMITRRLQMGETNG

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789261, Length=178, Percent_Identity=33.1460674157303, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1790244, Length=173, Percent_Identity=32.3699421965318, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 42695; Mature: 42564

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEELPGFVPRILRADDVSLLRADETVFDAMLDGWRAQMLARGLEIDTIKARCRVIARF
CCCHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VEFTNEYPWRWRANDVDQFLAELRSQATPIALSTLRSYSNAISMFCSYVSDSRYGWVDFC
HHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ERQFRDVPSQIVFEWNTPQHTTDDAVPPGRRAFTKAELQHLFDVVDDFVDDAHRKGSKRW
HHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LTALRDSTAFKIGYAFGLRRRELVMLDLTDFGPNPHVPRYGNFGAMTVRWAKGTKGSGPR
HHHHHCCCCEEEHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
RRTVLTSPEFPWVVDLLQYWCFEGRELFATADRSPALWPSERGDRLTLGALGRSFTAFRR
CCEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
LAGLPPELSLHALRHSYTTHLLEAGYDPLFVQQQLGHSYASTTSLYTSVSSDFKQKVIQQ
HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MITRRLQMGETNG
HHHHHHHCCCCCC
>Mature Secondary Structure 
AAEELPGFVPRILRADDVSLLRADETVFDAMLDGWRAQMLARGLEIDTIKARCRVIARF
CCHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VEFTNEYPWRWRANDVDQFLAELRSQATPIALSTLRSYSNAISMFCSYVSDSRYGWVDFC
HHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ERQFRDVPSQIVFEWNTPQHTTDDAVPPGRRAFTKAELQHLFDVVDDFVDDAHRKGSKRW
HHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LTALRDSTAFKIGYAFGLRRRELVMLDLTDFGPNPHVPRYGNFGAMTVRWAKGTKGSGPR
HHHHHCCCCEEEHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
RRTVLTSPEFPWVVDLLQYWCFEGRELFATADRSPALWPSERGDRLTLGALGRSFTAFRR
CCEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
LAGLPPELSLHALRHSYTTHLLEAGYDPLFVQQQLGHSYASTTSLYTSVSSDFKQKVIQQ
HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MITRRLQMGETNG
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA