| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799500
Identifier: 108799500
GI number: 108799500
Start: 2690458
End: 2691753
Strand: Reverse
Name: 108799500
Synonym: Mmcs_2533
Alternate gene names: NA
Gene position: 2691753-2690458 (Counterclockwise)
Preceding gene: 108799501
Following gene: 108799494
Centisome position: 47.18
GC content: 65.74
Gene sequence:
>1296_bases ATGGTCGATTTGGGGTTCTCTTCCGATGATCGGCCGCCGTGTGTCGGGAAGCGGGTGACGGCGACCGGGTTCTGTCTTGC GTTGACGCTGACCGGGTGCTCCTTTCAGGGGGTGAACTCGTTGCCGCTGCCCGGGGCCGAGGGGACGGGGCCGGGCGCCA CGTCCTACACGGTCGAGATCGCGAATGTCGCGACGCTGGAATCGAATGCGCCGGTGCTGATCGACGACGTCGTCGTCGGC AGCGTCCGCAAGATGACCGTCGACGACTGGCATGCCGAAGTGCAGATCTCGGTCAAACCCGACGTCGTGGTGCCTGCCAA CGCGGTGGCCACGGTCGGCCAGACCAGCCTGCTCGGGTCGATGCACCTGGCGCTCAACCCGCCGCTGGGGGAATCGCCGG AGGGTCGACTGCAAGCCGGTGCCACCATCCCCCTGAGTGATTCGTCGACCTATCCGAGCACCGAACGGACGTTGTCGTCG CTGTCGGTCGTCGCCAACGGCGGCGGGCTCGGACAGATCGGCGACATCATCCACGACTTCAACCTCGCGTTGTCCGGTCG TGAACCCGAGATCCGCCAACTGATCACCCGGCTCGACAACTTCGTCGGAGTCCTCGATGCGCAGCGTGAGAACATCATCG CGTCGATCCAGCAGTTGAACCGCGTTGCCGGCACGTTCGCCGGTCAGCGCGACACGATCGACCGGGCGCTCAAAGAGATT CCGCCGGCGTTGGACGTGCTGATCAGCGAACGGCCCCGGCTGACGGCCGCTTTGGACAAGCTCGGGAAACTGGGTGACAC CGCAACCGCTCTGGTTGAGGACGCCGGTGATGATCTGGTCAAGGATCTGGAGAATCTGGGGCCGGCTCTCGGGGCGCTCG CCGACATCGGACCCGACCTCAACCTCGCGCTGGCCTTCGCGACGGCCTTCCCCTACGGCCCTTATTACGGCGACCGGATC ACCCGTGGTGACTACATCAACCTGTTCGCCACCTTCGACATCACCTATCCGCGCCTGAAGAAGACGCTCCTGCAGGGCAC CCGGTGGGGTGATGAGAATGCCAAACTCATACCGGCTCCGGGTGATCCCTACTTCCTGAACTACTCGTACAGTCCCATGT CGATCGGTGTTGCGCCGCCACCGGGCGCGGTGCCGCCGGGCGCGACGTTGCCGACGGTGTCCGGACCGCTGCTCCCGGTG TCGCCACCCCCGCCGGCTGCGCCGTGGCTGCCGCAGGCACCGGTCAGTACCTCTGGGCAGATCTTCGCAGGACCCTATGG CCAGGACGCACCGTAG
Upstream 100 bases:
>100_bases GCAGTTTGGAGTCTTTCAACAGGGGCTTGTCTGGTCATTGTGTTTCGGCAAGACCAAAGATATGGTTCTGCAGGGCGGCT GACGGCTGAGGTGGAGCAGG
Downstream 100 bases:
>100_bases CCGGCCGCAGCCGGGTACCGGGCATTCCGCCTGACGGGGCTAGCCGACCATCACCGGCAGCCTCCCCCAGCCTCGCACGC TCGAGGTATGGGCCATGGCC
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; Mce Family Lipoe; Mammalian Cell Entry Related Domain Protein; MCE Family Lipoprotein LprM; Mce Related Protein; MCE Family Lipoprotein LprN; MCE Family LipoE; Mce Family Protein Mce5E; MCE-Family Lipoprotein LprN; MCE-Family Lipoprotein LprL; MCE Family Lipoprotein; MCE Family Lipoprotein LprK; Mce-Related Protein; LprM Protein; ABC-Type Transport System; MCE-Family Protein LprN; MCE-Family LipoE; Fis Family Transcriptional Regulator; Lipoprotein
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MVDLGFSSDDRPPCVGKRVTATGFCLALTLTGCSFQGVNSLPLPGAEGTGPGATSYTVEIANVATLESNAPVLIDDVVVG SVRKMTVDDWHAEVQISVKPDVVVPANAVATVGQTSLLGSMHLALNPPLGESPEGRLQAGATIPLSDSSTYPSTERTLSS LSVVANGGGLGQIGDIIHDFNLALSGREPEIRQLITRLDNFVGVLDAQRENIIASIQQLNRVAGTFAGQRDTIDRALKEI PPALDVLISERPRLTAALDKLGKLGDTATALVEDAGDDLVKDLENLGPALGALADIGPDLNLALAFATAFPYGPYYGDRI TRGDYINLFATFDITYPRLKKTLLQGTRWGDENAKLIPAPGDPYFLNYSYSPMSIGVAPPPGAVPPGATLPTVSGPLLPV SPPPPAAPWLPQAPVSTSGQIFAGPYGQDAP
Sequences:
>Translated_431_residues MVDLGFSSDDRPPCVGKRVTATGFCLALTLTGCSFQGVNSLPLPGAEGTGPGATSYTVEIANVATLESNAPVLIDDVVVG SVRKMTVDDWHAEVQISVKPDVVVPANAVATVGQTSLLGSMHLALNPPLGESPEGRLQAGATIPLSDSSTYPSTERTLSS LSVVANGGGLGQIGDIIHDFNLALSGREPEIRQLITRLDNFVGVLDAQRENIIASIQQLNRVAGTFAGQRDTIDRALKEI PPALDVLISERPRLTAALDKLGKLGDTATALVEDAGDDLVKDLENLGPALGALADIGPDLNLALAFATAFPYGPYYGDRI TRGDYINLFATFDITYPRLKKTLLQGTRWGDENAKLIPAPGDPYFLNYSYSPMSIGVAPPPGAVPPGATLPTVSGPLLPV SPPPPAAPWLPQAPVSTSGQIFAGPYGQDAP >Mature_431_residues MVDLGFSSDDRPPCVGKRVTATGFCLALTLTGCSFQGVNSLPLPGAEGTGPGATSYTVEIANVATLESNAPVLIDDVVVG SVRKMTVDDWHAEVQISVKPDVVVPANAVATVGQTSLLGSMHLALNPPLGESPEGRLQAGATIPLSDSSTYPSTERTLSS LSVVANGGGLGQIGDIIHDFNLALSGREPEIRQLITRLDNFVGVLDAQRENIIASIQQLNRVAGTFAGQRDTIDRALKEI PPALDVLISERPRLTAALDKLGKLGDTATALVEDAGDDLVKDLENLGPALGALADIGPDLNLALAFATAFPYGPYYGDRI TRGDYINLFATFDITYPRLKKTLLQGTRWGDENAKLIPAPGDPYFLNYSYSPMSIGVAPPPGAVPPGATLPTVSGPLLPV SPPPPAAPWLPQAPVSTSGQIFAGPYGQDAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44990; Mature: 44990
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDLGFSSDDRPPCVGKRVTATGFCLALTLTGCSFQGVNSLPLPGAEGTGPGATSYTVEI CEECCCCCCCCCCCCCCEEEHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE ANVATLESNAPVLIDDVVVGSVRKMTVDDWHAEVQISVKPDVVVPANAVATVGQTSLLGS EEEEEECCCCCEEEEEEHHCCHHEEEEECCCEEEEEEECCCEEECCCHHHHCCCHHHHEE MHLALNPPLGESPEGRLQAGATIPLSDSSTYPSTERTLSSLSVVANGGGLGQIGDIIHDF EEEEECCCCCCCCCCCEECCCEEECCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHH NLALSGREPEIRQLITRLDNFVGVLDAQRENIIASIQQLNRVAGTFAGQRDTIDRALKEI HEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC PPALDVLISERPRLTAALDKLGKLGDTATALVEDAGDDLVKDLENLGPALGALADIGPDL CHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCCCC NLALAFATAFPYGPYYGDRITRGDYINLFATFDITYPRLKKTLLQGTRWGDENAKLIPAP EEEEEEEHHCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEECC GDPYFLNYSYSPMSIGVAPPPGAVPPGATLPTVSGPLLPVSPPPPAAPWLPQAPVSTSGQ CCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCE IFAGPYGQDAP EEECCCCCCCC >Mature Secondary Structure MVDLGFSSDDRPPCVGKRVTATGFCLALTLTGCSFQGVNSLPLPGAEGTGPGATSYTVEI CEECCCCCCCCCCCCCCEEEHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE ANVATLESNAPVLIDDVVVGSVRKMTVDDWHAEVQISVKPDVVVPANAVATVGQTSLLGS EEEEEECCCCCEEEEEEHHCCHHEEEEECCCEEEEEEECCCEEECCCHHHHCCCHHHHEE MHLALNPPLGESPEGRLQAGATIPLSDSSTYPSTERTLSSLSVVANGGGLGQIGDIIHDF EEEEECCCCCCCCCCCEECCCEEECCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHH NLALSGREPEIRQLITRLDNFVGVLDAQRENIIASIQQLNRVAGTFAGQRDTIDRALKEI HEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC PPALDVLISERPRLTAALDKLGKLGDTATALVEDAGDDLVKDLENLGPALGALADIGPDL CHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCCCC NLALAFATAFPYGPYYGDRITRGDYINLFATFDITYPRLKKTLLQGTRWGDENAKLIPAP EEEEEEEHHCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEECC GDPYFLNYSYSPMSIGVAPPPGAVPPGATLPTVSGPLLPVSPPPPAAPWLPQAPVSTSGQ CCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCE IFAGPYGQDAP EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA