| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799311
Identifier: 108799311
GI number: 108799311
Start: 2489754
End: 2490374
Strand: Reverse
Name: 108799311
Synonym: Mmcs_2344
Alternate gene names: NA
Gene position: 2490374-2489754 (Counterclockwise)
Preceding gene: 108799318
Following gene: 108799310
Centisome position: 43.65
GC content: 70.21
Gene sequence:
>621_bases GTGTTCGCACGCACAACCACAATCGAGGCACGACCGGACGCGGTGGACGCCGGCGTCGCTCACATCCGCAACGAGGTCAT GCCGGTACTGCGCGACGTCGACGGCTGTGTCGGGCTGTCCCTTCTGGTGGATCGGGAGTCGTCCCGGTGCATCGCGACCA CCGCCTGGGAGTCGGTCGAGGCGATGCACGCCGCCGAGGAGCGGGTGCGGCCGGTACGCGAGCGCGCCGCGGAGGTGTTC GGCGGCACTCCGGTCGTCGACGAGTGGGAGATCGCGGTCCTGCACCGCGAACACCGCGCCGGCGCCGGCGCCGGGGTACG GGCGACCTGGCTGAGGGCCCGCCCAGAACAGTTCGATCAGGCGGTCGCCTTCTACCGCTCAGAGGTGCTGCCGTCGATCG AGGAACTGGACGGGTTCTGCAGCGCCAGCCTGATGATCGACCGCACCTCGGGGCGGGCGGTCTCCTCGGTGTCGTTCGAC TCGATGGGAGCGATGGACCGCACCCGCGATCAGGCCCGCTCGTTGCGCACCGCCCGGCTGCGCGATCTCGGCGCCGACCA ACTCGACGTCGGCGAGTTCGAGTTGGTGATCGCGAACCTGCGCGTCCCCGAAATGGCCTGA
Upstream 100 bases:
>100_bases CCGCTCAGACCATTGCCCGGTCCGATGCGAGGGAGGACAGTGAGAGGGGAACCGGTGGCGCCACCGGGGCGCTGCCCCGT CACCCGAAGGGGGTGAGGCT
Downstream 100 bases:
>100_bases CGCACATGCGATTGACGCGCGCGTTTATTCGTGGCGCTGCCCGGGTATCTCCGCAGCACCCACACCTCTTGGAGGAACCA TGACAGTCACCGGTGTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MFARTTTIEARPDAVDAGVAHIRNEVMPVLRDVDGCVGLSLLVDRESSRCIATTAWESVEAMHAAEERVRPVRERAAEVF GGTPVVDEWEIAVLHREHRAGAGAGVRATWLRARPEQFDQAVAFYRSEVLPSIEELDGFCSASLMIDRTSGRAVSSVSFD SMGAMDRTRDQARSLRTARLRDLGADQLDVGEFELVIANLRVPEMA
Sequences:
>Translated_206_residues MFARTTTIEARPDAVDAGVAHIRNEVMPVLRDVDGCVGLSLLVDRESSRCIATTAWESVEAMHAAEERVRPVRERAAEVF GGTPVVDEWEIAVLHREHRAGAGAGVRATWLRARPEQFDQAVAFYRSEVLPSIEELDGFCSASLMIDRTSGRAVSSVSFD SMGAMDRTRDQARSLRTARLRDLGADQLDVGEFELVIANLRVPEMA >Mature_206_residues MFARTTTIEARPDAVDAGVAHIRNEVMPVLRDVDGCVGLSLLVDRESSRCIATTAWESVEAMHAAEERVRPVRERAAEVF GGTPVVDEWEIAVLHREHRAGAGAGVRATWLRARPEQFDQAVAFYRSEVLPSIEELDGFCSASLMIDRTSGRAVSSVSFD SMGAMDRTRDQARSLRTARLRDLGADQLDVGEFELVIANLRVPEMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2558 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22684; Mature: 22684
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFARTTTIEARPDAVDAGVAHIRNEVMPVLRDVDGCVGLSLLVDRESSRCIATTAWESVE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCEEEEHHHHHHH AMHAAEERVRPVRERAAEVFGGTPVVDEWEIAVLHREHRAGAGAGVRATWLRARPEQFDQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHCCCCCCCCCHHHHHCCHHHHHH AVAFYRSEVLPSIEELDGFCSASLMIDRTSGRAVSSVSFDSMGAMDRTRDQARSLRTARL HHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHH RDLGADQLDVGEFELVIANLRVPEMA HHCCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MFARTTTIEARPDAVDAGVAHIRNEVMPVLRDVDGCVGLSLLVDRESSRCIATTAWESVE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCEEEEHHHHHHH AMHAAEERVRPVRERAAEVFGGTPVVDEWEIAVLHREHRAGAGAGVRATWLRARPEQFDQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHCCCCCCCCCHHHHHCCHHHHHH AVAFYRSEVLPSIEELDGFCSASLMIDRTSGRAVSSVSFDSMGAMDRTRDQARSLRTARL HHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHH RDLGADQLDVGEFELVIANLRVPEMA HHCCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]