| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108799157
Identifier: 108799157
GI number: 108799157
Start: 2329555
End: 2330067
Strand: Reverse
Name: 108799157
Synonym: Mmcs_2190
Alternate gene names: NA
Gene position: 2330067-2329555 (Counterclockwise)
Preceding gene: 108799160
Following gene: 108799155
Centisome position: 40.84
GC content: 71.15
Gene sequence:
>513_bases GTGGACACGACGTCACAGATTACTCTGAGGCCCGTGTCCGACACGCGCGCAACCACCCAAACGGTGCGCTACCGCGAACG GCTCTCCGTGCCGTGGTGGTGGTGGCTACCCGGACTCGGGCTGGCGGGACTGATCGCCTACGAGGTCAACCTCGGTGTCG AAGCCCTGCCGGACTGGGTGCCGTTCGCCGTTCTGCTCCCGGTGGCCGCCGTCGTGCTGGCGTGGTTCGGCCGCGCCGAG ATCCGCGTGGTCGGCGGCCCCGCCGGCGAGACCGAACTGTGGGTCGGAGACGCGCACCTGCCGGTCAGCGTCGTCGCGAA ATCGGCGGAGGTGCCCAGGACGGCGAAATCCGCGGCACTCGGGCGCCAACTCGACCCGGCCGCCTATGTCGTGCACCGGG CCTGGGTCGGCCCGATGATCCTGCTGGTCCTCGACGATCCCGAGGACCCCACGCCCTACTGGCTGGTGAGCACCCGCCAC CCCGACCGGGTGCTGTCCGCGCTCGGCCGCTGA
Upstream 100 bases:
>100_bases TTCGACATCGCGGGCGCTGAACAGGTCGACGCCCGCGTCACCGTCATGAGCCCTGGCGGGCATCGGTAGCTCGCGGTCCA GACGCAGGACCGCCAGAGAG
Downstream 100 bases:
>100_bases CCGTCAGGCCGCGCAGTCCGAGCAGATCATCACGCCGTTCTTCTCGCTGGCGAGACGGCTGCGGTGGTGGACCAGGAAGC AGCTGGAGCAGGTGAACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Alanine Rich Membrane Protein; Integral Membrane Protein
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MDTTSQITLRPVSDTRATTQTVRYRERLSVPWWWWLPGLGLAGLIAYEVNLGVEALPDWVPFAVLLPVAAVVLAWFGRAE IRVVGGPAGETELWVGDAHLPVSVVAKSAEVPRTAKSAALGRQLDPAAYVVHRAWVGPMILLVLDDPEDPTPYWLVSTRH PDRVLSALGR
Sequences:
>Translated_170_residues MDTTSQITLRPVSDTRATTQTVRYRERLSVPWWWWLPGLGLAGLIAYEVNLGVEALPDWVPFAVLLPVAAVVLAWFGRAE IRVVGGPAGETELWVGDAHLPVSVVAKSAEVPRTAKSAALGRQLDPAAYVVHRAWVGPMILLVLDDPEDPTPYWLVSTRH PDRVLSALGR >Mature_170_residues MDTTSQITLRPVSDTRATTQTVRYRERLSVPWWWWLPGLGLAGLIAYEVNLGVEALPDWVPFAVLLPVAAVVLAWFGRAE IRVVGGPAGETELWVGDAHLPVSVVAKSAEVPRTAKSAALGRQLDPAAYVVHRAWVGPMILLVLDDPEDPTPYWLVSTRH PDRVLSALGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18650; Mature: 18650
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTTSQITLRPVSDTRATTQTVRYRERLSVPWWWWLPGLGLAGLIAYEVNLGVEALPDWV CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHCCCHHHHEEEEECCCHHHCCCHH PFAVLLPVAAVVLAWFGRAEIRVVGGPAGETELWVGDAHLPVSVVAKSAEVPRTAKSAAL HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCHHHHHCCCCCCCHHHHHHH GRQLDPAAYVVHRAWVGPMILLVLDDPEDPTPYWLVSTRHPDRVLSALGR CCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHHCC >Mature Secondary Structure MDTTSQITLRPVSDTRATTQTVRYRERLSVPWWWWLPGLGLAGLIAYEVNLGVEALPDWV CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHCCCHHHHEEEEECCCHHHCCCHH PFAVLLPVAAVVLAWFGRAEIRVVGGPAGETELWVGDAHLPVSVVAKSAEVPRTAKSAAL HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCHHHHHCCCCCCCHHHHHHH GRQLDPAAYVVHRAWVGPMILLVLDDPEDPTPYWLVSTRHPDRVLSALGR CCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA