| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799126
Identifier: 108799126
GI number: 108799126
Start: 2299550
End: 2300929
Strand: Reverse
Name: 108799126
Synonym: Mmcs_2159
Alternate gene names: NA
Gene position: 2300929-2299550 (Counterclockwise)
Preceding gene: 108799133
Following gene: 108799123
Centisome position: 40.33
GC content: 73.19
Gene sequence:
>1380_bases ATGACAACCAGCGAGCCGGGTGCGACCTCGGAGGCGAACAACGAGGTGACGCCACGTCCGGCGCCGGGGCCCGCGCCCCG GCCCGGGCCCTCACCCCGACCGGGGCCGCCGCGGCCTGCCCCTCGACCGGGCCGGTCGACACCGGTGCCCGCGGTGGTGG CGCCACCGGCCAGCGACCCGCACCGGTTCGGCCGGGTCGATCCCGACGGCACCGTGTGGCTGATCACGGGATCGGGTGAG CGTGTCATCGGTTCCTGGCAGGCGGGTGAACCCGAAGCGGCGTACGCCCACTTCGGGCGCCGCTTCGACGATCTGCAGAC CGAGGTGGTGCTGCTCGAGCAGCGGCTGGTCACCCACGCCGGCGACGCCCGCAAGATCAAGACCGCCGCGGCCGCACTCG CCGAGAGCCTGCCGGAGGCCCACGTACTCGGTGACGTGGACTCGCTGGCGACGCGACTGACCGCGATCGTCGAACACGCC GACGAGGAGGCCCAGGCCGAGCGGGCCCGCCGCGACGAACAGCGGGCCGCCCAGTTGGCGCGCAAGGAGACGCTGGCCGC CGAGGCCGAGGACATCGCCACCAACTCGACGCAGTGGAAGACCGCAGGCGACCGGCTCCGCGAGATCCTCGACGAGTGGC GCACGATCACCGGCCTGGACCGCAAGACCGACGATGCGCTGTGGAAGCGTTATTCGGCGGCCCGCGAGACGTTCAACCGG CGGCGCGGTTCGCACTTCGCCGAACTCGACCGGGGCCGCGCGGGGGCACGGCAGGCCAAGGAGGCGCTGTGCGAACGTGC CGAGGAGCTGTCCGGGTCCCGCGAGTGGGGTGCGACGAGCGCCGCGTTCCGTGACCTGCTCGCGGAGTGGAAGGCCGCGG GCCGGGCGGCCAAAGATGTCGACGACGCCCTCTGGCAGCGGTTCAAGGCCGCCCAGGACGTCTTCTTCTCGGCACGCAAC GCCGCGACCGCCGAGCGCGACGCGGAGTTCAAGGCGAACGCCGCGGCCAAGGAGGCCCTGCTCGCGCAGGCCGAACAGAT CGACACCTCCAACCCGGACGCCGCGCGCGCCGCGTTCCGCGCGATCGGCGACAAATGGGACGCCATCGGCAAGGTGCCCC GCGAGCGGGTCGCCGAATTCGATCGACGCCTGCGCGCGGTGGAGAAGAAGGTCCGCGACGCCGCGTCGTCGAACTGGACC GACCCCGAGGCGCAGGCCCGCGCCGACCAGTTCCGGGTCCGTGCCGAACAGTACGAGCGGCAGGCGGAGAAGGCCGAGGC CGCGGGTCGCACCAAGGACGCCGAACAGGCGCGCGCGAACGCCGAACAGTGGCGTCAGTGGGCCGACGCCGCGGTCGAGG CGCTGGGCAAGCGACGCTAG
Upstream 100 bases:
>100_bases GGCTCCGACGGCCAGGCAGACCGATCCATATCGACAGGCAAGGGCGCCGCGTTGCGCGGCAGTGCGCGGTCCACCGCGCG GAGGGTGCGAGGAACGAGAG
Downstream 100 bases:
>100_bases ACGCCCGGTCGGGCGGGGCCGTCCTGGTCGTCGCGGGGCTCGTCGCCGAAGTCCAGCAGCCCCTTGCCCTGGTTCTCCGC GGCGCGGCGGCGGCGCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MTTSEPGATSEANNEVTPRPAPGPAPRPGPSPRPGPPRPAPRPGRSTPVPAVVAPPASDPHRFGRVDPDGTVWLITGSGE RVIGSWQAGEPEAAYAHFGRRFDDLQTEVVLLEQRLVTHAGDARKIKTAAAALAESLPEAHVLGDVDSLATRLTAIVEHA DEEAQAERARRDEQRAAQLARKETLAAEAEDIATNSTQWKTAGDRLREILDEWRTITGLDRKTDDALWKRYSAARETFNR RRGSHFAELDRGRAGARQAKEALCERAEELSGSREWGATSAAFRDLLAEWKAAGRAAKDVDDALWQRFKAAQDVFFSARN AATAERDAEFKANAAAKEALLAQAEQIDTSNPDAARAAFRAIGDKWDAIGKVPRERVAEFDRRLRAVEKKVRDAASSNWT DPEAQARADQFRVRAEQYERQAEKAEAAGRTKDAEQARANAEQWRQWADAAVEALGKRR
Sequences:
>Translated_459_residues MTTSEPGATSEANNEVTPRPAPGPAPRPGPSPRPGPPRPAPRPGRSTPVPAVVAPPASDPHRFGRVDPDGTVWLITGSGE RVIGSWQAGEPEAAYAHFGRRFDDLQTEVVLLEQRLVTHAGDARKIKTAAAALAESLPEAHVLGDVDSLATRLTAIVEHA DEEAQAERARRDEQRAAQLARKETLAAEAEDIATNSTQWKTAGDRLREILDEWRTITGLDRKTDDALWKRYSAARETFNR RRGSHFAELDRGRAGARQAKEALCERAEELSGSREWGATSAAFRDLLAEWKAAGRAAKDVDDALWQRFKAAQDVFFSARN AATAERDAEFKANAAAKEALLAQAEQIDTSNPDAARAAFRAIGDKWDAIGKVPRERVAEFDRRLRAVEKKVRDAASSNWT DPEAQARADQFRVRAEQYERQAEKAEAAGRTKDAEQARANAEQWRQWADAAVEALGKRR >Mature_458_residues TTSEPGATSEANNEVTPRPAPGPAPRPGPSPRPGPPRPAPRPGRSTPVPAVVAPPASDPHRFGRVDPDGTVWLITGSGER VIGSWQAGEPEAAYAHFGRRFDDLQTEVVLLEQRLVTHAGDARKIKTAAAALAESLPEAHVLGDVDSLATRLTAIVEHAD EEAQAERARRDEQRAAQLARKETLAAEAEDIATNSTQWKTAGDRLREILDEWRTITGLDRKTDDALWKRYSAARETFNRR RGSHFAELDRGRAGARQAKEALCERAEELSGSREWGATSAAFRDLLAEWKAAGRAAKDVDDALWQRFKAAQDVFFSARNA ATAERDAEFKANAAAKEALLAQAEQIDTSNPDAARAAFRAIGDKWDAIGKVPRERVAEFDRRLRAVEKKVRDAASSNWTD PEAQARADQFRVRAEQYERQAEKAEAAGRTKDAEQARANAEQWRQWADAAVEALGKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50435; Mature: 50304
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSEPGATSEANNEVTPRPAPGPAPRPGPSPRPGPPRPAPRPGRSTPVPAVVAPPASDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCH HRFGRVDPDGTVWLITGSGERVIGSWQAGEPEAAYAHFGRRFDDLQTEVVLLEQRLVTHA HHCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDARKIKTAAAALAESLPEAHVLGDVDSLATRLTAIVEHADEEAQAERARRDEQRAAQLA CCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKETLAAEAEDIATNSTQWKTAGDRLREILDEWRTITGLDRKTDDALWKRYSAARETFNR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH RRGSHFAELDRGRAGARQAKEALCERAEELSGSREWGATSAAFRDLLAEWKAAGRAAKDV HCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH DDALWQRFKAAQDVFFSARNAATAERDAEFKANAAAKEALLAQAEQIDTSNPDAARAAFR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AIGDKWDAIGKVPRERVAEFDRRLRAVEKKVRDAASSNWTDPEAQARADQFRVRAEQYER HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH QAEKAEAAGRTKDAEQARANAEQWRQWADAAVEALGKRR HHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTSEPGATSEANNEVTPRPAPGPAPRPGPSPRPGPPRPAPRPGRSTPVPAVVAPPASDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCH HRFGRVDPDGTVWLITGSGERVIGSWQAGEPEAAYAHFGRRFDDLQTEVVLLEQRLVTHA HHCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDARKIKTAAAALAESLPEAHVLGDVDSLATRLTAIVEHADEEAQAERARRDEQRAAQLA CCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKETLAAEAEDIATNSTQWKTAGDRLREILDEWRTITGLDRKTDDALWKRYSAARETFNR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH RRGSHFAELDRGRAGARQAKEALCERAEELSGSREWGATSAAFRDLLAEWKAAGRAAKDV HCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH DDALWQRFKAAQDVFFSARNAATAERDAEFKANAAAKEALLAQAEQIDTSNPDAARAAFR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AIGDKWDAIGKVPRERVAEFDRRLRAVEKKVRDAASSNWTDPEAQARADQFRVRAEQYER HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH QAEKAEAAGRTKDAEQARANAEQWRQWADAAVEALGKRR HHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA