Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108799107

Identifier: 108799107

GI number: 108799107

Start: 2284074

End: 2284718

Strand: Reverse

Name: 108799107

Synonym: Mmcs_2140

Alternate gene names: NA

Gene position: 2284718-2284074 (Counterclockwise)

Preceding gene: 108799108

Following gene: 108799106

Centisome position: 40.04

GC content: 67.91

Gene sequence:

>645_bases
GTGACCGCCGATGTGAGGTTCACCGTGCAGGATGTGACACCCGAACGCTACGCCGTCACACCGGTTCTGACCGCACGGAT
CGAGGTCACCGCCACCGGTGACGACCCGGTGCACGCCATCGCGCTGCGCTGTCAGGTCCGCATCGACCCGCTGCGGCGCG
GGTACACCGACGATGAGGCGGAAGGTCTCGCCGACCTGTTCGGCCCACGCGAGCGTTGGGGCACCACGCAACACACGTTC
CTGTGGCAGCACAGCGCGACGATGGTGCCCGGATTCTCCGGCGGCACGCACGTCGACCTGCCCCTGGAGTGCACGTACGA
CGTGGAGGTCGCCGCGGCGAAATACATGCACGCCCTGCGCGACGGTGTGATCCCGCTGCAGTTCCTGTTCAGCGGAACGC
TGTTCACCCGCGGTGAGCGGGGATTCGCCGTGACGCAGATTTCGTGGGACCGCGAGGACACCTACCGGCTGCCGGTGACG
GTGTGGCGTGACCTGATCGCACTGCACTACCCGAACACCGGTTGGCTGCGGTTGTCGCACGACACCATCGCCGCGCTCAC
CGCCTACCGGTCCGCACACGGACTCCTGTCCTGCGACGACGCCGTCACCGCGCTGCTGTCCCAGGCCAGGCAGGAGGTGC
CGTGA

Upstream 100 bases:

>100_bases
TGCGCATGCTGTGGCACGGGTTCGACGGCGGCGCCGAGGTCCGCGACTATCTCACCGGGTTCTTCGACGCGGTCGCCGAA
CGGTGCAGGACGGTGCCGCG

Downstream 100 bases:

>100_bases
ACGCCGACTGGGCCAGGGCCCGCAAGGTCGCCGACGCCGTTCTCTACGAGGGGTACCTGCTGTACCCGTACCGCGCGACG
TCGCGGAAGAACCAGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTADVRFTVQDVTPERYAVTPVLTARIEVTATGDDPVHAIALRCQVRIDPLRRGYTDDEAEGLADLFGPRERWGTTQHTF
LWQHSATMVPGFSGGTHVDLPLECTYDVEVAAAKYMHALRDGVIPLQFLFSGTLFTRGERGFAVTQISWDREDTYRLPVT
VWRDLIALHYPNTGWLRLSHDTIAALTAYRSAHGLLSCDDAVTALLSQARQEVP

Sequences:

>Translated_214_residues
MTADVRFTVQDVTPERYAVTPVLTARIEVTATGDDPVHAIALRCQVRIDPLRRGYTDDEAEGLADLFGPRERWGTTQHTF
LWQHSATMVPGFSGGTHVDLPLECTYDVEVAAAKYMHALRDGVIPLQFLFSGTLFTRGERGFAVTQISWDREDTYRLPVT
VWRDLIALHYPNTGWLRLSHDTIAALTAYRSAHGLLSCDDAVTALLSQARQEVP
>Mature_213_residues
TADVRFTVQDVTPERYAVTPVLTARIEVTATGDDPVHAIALRCQVRIDPLRRGYTDDEAEGLADLFGPRERWGTTQHTFL
WQHSATMVPGFSGGTHVDLPLECTYDVEVAAAKYMHALRDGVIPLQFLFSGTLFTRGERGFAVTQISWDREDTYRLPVTV
WRDLIALHYPNTGWLRLSHDTIAALTAYRSAHGLLSCDDAVTALLSQARQEVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23914; Mature: 23783

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADVRFTVQDVTPERYAVTPVLTARIEVTATGDDPVHAIALRCQVRIDPLRRGYTDDEA
CCCCEEEEEECCCCCCEEECEEEEEEEEEEECCCCCEEEEEEEEEEEECHHHCCCCCCHH
EGLADLFGPRERWGTTQHTFLWQHSATMVPGFSGGTHVDLPLECTYDVEVAAAKYMHALR
HHHHHHCCCHHHCCCCCEEEEEECCCEECCCCCCCCEEECCEEEECCHHHHHHHHHHHHH
DGVIPLQFLFSGTLFTRGERGFAVTQISWDREDTYRLPVTVWRDLIALHYPNTGWLRLSH
CCCCEEHHHHCCCEEECCCCCEEEEEEECCCCCCEECCHHHHHHHHEEECCCCCEEEECC
DTIAALTAYRSAHGLLSCDDAVTALLSQARQEVP
HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TADVRFTVQDVTPERYAVTPVLTARIEVTATGDDPVHAIALRCQVRIDPLRRGYTDDEA
CCCEEEEEECCCCCCEEECEEEEEEEEEEECCCCCEEEEEEEEEEEECHHHCCCCCCHH
EGLADLFGPRERWGTTQHTFLWQHSATMVPGFSGGTHVDLPLECTYDVEVAAAKYMHALR
HHHHHHCCCHHHCCCCCEEEEEECCCEECCCCCCCCEEECCEEEECCHHHHHHHHHHHHH
DGVIPLQFLFSGTLFTRGERGFAVTQISWDREDTYRLPVTVWRDLIALHYPNTGWLRLSH
CCCCEEHHHHCCCEEECCCCCEEEEEEECCCCCCEECCHHHHHHHHEEECCCCCEEEECC
DTIAALTAYRSAHGLLSCDDAVTALLSQARQEVP
HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA