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The map label for this gene is 108798810

Identifier: 108798810

GI number: 108798810

Start: 1984830

End: 1985510

Strand: Reverse

Name: 108798810

Synonym: Mmcs_1842

Alternate gene names: NA

Gene position: 1985510-1984830 (Counterclockwise)

Preceding gene: 108798819

Following gene: 108798805

Centisome position: 34.8

GC content: 70.04

Gene sequence:

>681_bases
ATGCCGCTCACCCGGGCCGGTCGTCCCCGCCTGAACACCGCACGCCGTCCGGGCATGACCGCCCGCGACGAAATACTCGA
CGCCGCAGGCGAACTCTTCACCACCCTGGGATACGCGAGCACCTCGACGCGCCACATCGCCGAACTGGTCGGCATCCGGC
AGGCCTCGCTGTACCACTACTTCAGGACCAAGGACGACATCCTGTGCGCTCTGCTGAGCCAGACGGTCAGCCCCACGCTG
GGGTTCATCCCCAGCCTGCTCGGTGCGCAGCCGGCGTTGACGGCCGCCGAGCACCTGCACGCGCTGGCCACGTTCGACGG
TGACCAACTGCTCAGCGGGCCGTGGAATCTGGGTGCGCTGTACCTGCTGCCCGAGCTGAGGGATGCGCGGCTGGAACCGT
TCTGGTCCGACCGCGAGCGGCTGCGTCTGCACTACCTCGCGCTCAGCCGCGCCGTCGTCGAACAGACCGGCGTCCACGAG
GCGGCCGCGGATCTGCCGTTCCGGCTGGTGGAGTCGCTGGTCAACATGTGGTCGACGCCGCCGGGTCCACAGCGCGACGA
ACTGCCGGTGCACGTCGCCGACGCCTGCCTGCGGGTGCTCGGGATCCCCGACGGCGCCATCGCCGCGCTGCGGGTTCGCA
GCAGCGACGCGGTGGCGAGTTACACGCGCTCGCTGAGCTGA

Upstream 100 bases:

>100_bases
AATCGACGGCACACGTAACTGATGCGTATCGCGCGTTTCTGTCGTGTGACAGAAACCAGGGGGTGTACCCATCGGCGGCT
TCGTGGTCCACGATGGAACC

Downstream 100 bases:

>100_bases
CCGGAGCCCAGGTAGTTCCGCCAGTCGCCGTAGGACGAGATGTCCTCACCGCTCTGCCACGCGTCGAGTGCGCATCCGAA
CCCGACGACCTCGGTGCCGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcription Regulator AmtR; Regulatory Protein TetR; MalT Family Transcriptional Regulator; HTH-Type Pregulator; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcriptional Regulator; TetR Family Regulatory Protein; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MPLTRAGRPRLNTARRPGMTARDEILDAAGELFTTLGYASTSTRHIAELVGIRQASLYHYFRTKDDILCALLSQTVSPTL
GFIPSLLGAQPALTAAEHLHALATFDGDQLLSGPWNLGALYLLPELRDARLEPFWSDRERLRLHYLALSRAVVEQTGVHE
AAADLPFRLVESLVNMWSTPPGPQRDELPVHVADACLRVLGIPDGAIAALRVRSSDAVASYTRSLS

Sequences:

>Translated_226_residues
MPLTRAGRPRLNTARRPGMTARDEILDAAGELFTTLGYASTSTRHIAELVGIRQASLYHYFRTKDDILCALLSQTVSPTL
GFIPSLLGAQPALTAAEHLHALATFDGDQLLSGPWNLGALYLLPELRDARLEPFWSDRERLRLHYLALSRAVVEQTGVHE
AAADLPFRLVESLVNMWSTPPGPQRDELPVHVADACLRVLGIPDGAIAALRVRSSDAVASYTRSLS
>Mature_225_residues
PLTRAGRPRLNTARRPGMTARDEILDAAGELFTTLGYASTSTRHIAELVGIRQASLYHYFRTKDDILCALLSQTVSPTLG
FIPSLLGAQPALTAAEHLHALATFDGDQLLSGPWNLGALYLLPELRDARLEPFWSDRERLRLHYLALSRAVVEQTGVHEA
AADLPFRLVESLVNMWSTPPGPQRDELPVHVADACLRVLGIPDGAIAALRVRSSDAVASYTRSLS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24717; Mature: 24585

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTRAGRPRLNTARRPGMTARDEILDAAGELFTTLGYASTSTRHIAELVGIRQASLYHY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FRTKDDILCALLSQTVSPTLGFIPSLLGAQPALTAAEHLHALATFDGDQLLSGPWNLGAL
HHCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCE
YLLPELRDARLEPFWSDRERLRLHYLALSRAVVEQTGVHEAAADLPFRLVESLVNMWSTP
EECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCC
PGPQRDELPVHVADACLRVLGIPDGAIAALRVRSSDAVASYTRSLS
CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
PLTRAGRPRLNTARRPGMTARDEILDAAGELFTTLGYASTSTRHIAELVGIRQASLYHY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FRTKDDILCALLSQTVSPTLGFIPSLLGAQPALTAAEHLHALATFDGDQLLSGPWNLGAL
HHCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCE
YLLPELRDARLEPFWSDRERLRLHYLALSRAVVEQTGVHEAAADLPFRLVESLVNMWSTP
EECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCC
PGPQRDELPVHVADACLRVLGIPDGAIAALRVRSSDAVASYTRSLS
CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA