| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798802
Identifier: 108798802
GI number: 108798802
Start: 1974686
End: 1975045
Strand: Reverse
Name: 108798802
Synonym: Mmcs_1834
Alternate gene names: NA
Gene position: 1975045-1974686 (Counterclockwise)
Preceding gene: 108798804
Following gene: 108798801
Centisome position: 34.62
GC content: 66.94
Gene sequence:
>360_bases ATGCCTGCTAAGGCTAGGCTTTCCTTGATCACTCTGATCACCGCCATCGCCGTGGTCGCCGTCGGCTGCGGCGGCTCGAC CTCGTCGGAGGACAACGAGTCGGCGGCTCCAGCAACGACCTCCGCACAGGCGGGCACGGTCGGCGAAAAGGTGTCCGCCA ACACCGCGTCGGCGGAGGAGATCACCGCCGGCCTGGAGTCGGCCGGCGTCCCGAATGCGGAGCGGTGGGCCGAAGAGGTC GTCGAGTACCGCCCGTATCCCCCGGACGATCCCAACCTGCAGAAACTGCGGGACAACCTCGCGAAGTACAACCCGGGTCA GGACACCGTCGACAAGATCGTGTCGGCGCTGACGCCGTGA
Upstream 100 bases:
>100_bases AGCGAACTCTCAGCGAACATCGGACGCCGAGATGACCGAATGCGGACGTCGCGCAACGCCGCCGTCCTACACTCGGCCGC AGACCGAAGGGAGAAAGATA
Downstream 100 bases:
>100_bases CGATCACCCGGACCCGGCCGTCCGCGACGGGGACGACGCTCGTGCGGCGGGCGCTGCTGGCGCTGACGCTGGCCGGCATC CTCGCGACCGCGTTCGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPAKARLSLITLITAIAVVAVGCGGSTSSEDNESAAPATTSAQAGTVGEKVSANTASAEEITAGLESAGVPNAERWAEEV VEYRPYPPDDPNLQKLRDNLAKYNPGQDTVDKIVSALTP
Sequences:
>Translated_119_residues MPAKARLSLITLITAIAVVAVGCGGSTSSEDNESAAPATTSAQAGTVGEKVSANTASAEEITAGLESAGVPNAERWAEEV VEYRPYPPDDPNLQKLRDNLAKYNPGQDTVDKIVSALTP >Mature_118_residues PAKARLSLITLITAIAVVAVGCGGSTSSEDNESAAPATTSAQAGTVGEKVSANTASAEEITAGLESAGVPNAERWAEEVV EYRPYPPDDPNLQKLRDNLAKYNPGQDTVDKIVSALTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12270; Mature: 12138
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKARLSLITLITAIAVVAVGCGGSTSSEDNESAAPATTSAQAGTVGEKVSANTASAEE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ITAGLESAGVPNAERWAEEVVEYRPYPPDDPNLQKLRDNLAKYNPGQDTVDKIVSALTP HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure PAKARLSLITLITAIAVVAVGCGGSTSSEDNESAAPATTSAQAGTVGEKVSANTASAEE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ITAGLESAGVPNAERWAEEVVEYRPYPPDDPNLQKLRDNLAKYNPGQDTVDKIVSALTP HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA