| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yfcA [C]
Identifier: 108798774
GI number: 108798774
Start: 1948967
End: 1949776
Strand: Reverse
Name: yfcA [C]
Synonym: Mmcs_1806
Alternate gene names: 108798774
Gene position: 1949776-1948967 (Counterclockwise)
Preceding gene: 108798776
Following gene: 108798771
Centisome position: 34.17
GC content: 72.84
Gene sequence:
>810_bases GTGCAAACACTTTCTCTCGCCGATCGGCCGCGGCGGGGCGGCACTAAGGTCGTCGCAATGGGTTGGCCCGAGTTCGGTCT GTTGCTGGCCGCAGGCGTCCTGGGCGGCCTCACCGGCAGCATCGCGGGGTTGGCGTCGGTGGCCACCTATCCCGCACTGT TGCTCGCCGGTCTGCCGCCGGTGGCGGCCAACGTCACGAACACGGTGTCGCTGGTGTTCAACGGCATCGGATCGGTGCTG GGTTCGCAGCCCGAACTGCGGGGTCAGGGCGGGTGGCTGCGGCGCATCGTGCCGGCCGCCGCGCTCGGCGGGGTGGCGGG CGCGGCGCTGCTGCTGTCGACACCGGCCGAGGGGTTCGAGAAGGTCGTCCCGATCCTGCTGGGCGGGTCCGCGGTGCTGA TCCTGCTGCCCCGCCGGTCGGCTCCGGCGCACCCGGGGCATCGTCCGCACGCCGGCCTGTGGGCATCGGCAGCGATCTTG GCCATCTGCATCTACGGCGGCTACTTCGGCGCGGCGGCCGGAGTGCTGCTGCTGGCGTTGCTGCTGACCACGGGGACCGA CACCCTCGCGCACGCGAACGCGGGCAAGAACGTCGTCCTCGGGGTCGCCAACGCGACCGCGGCGCTGGTCTTCGCGGTGT TCGCGCCGGTGCACTGGGTGGCGGTGATCCCCCTGGGCGCGGGCTGCCTGATGGGGTCCAGGCTGGGCCCGGTGGTGGTG CGCCGGGCGCCGGCCGGGCCGATGCGCATTCTCATCGGGCTCGCGGGCGTCGGCCTGGCGGTCAAACTCGGTGTCGACGC CTACCGCTGA
Upstream 100 bases:
>100_bases CGACCCACAGCGAGGGGTCGGTCCGGATCAGACCCCGCTGCGGGTTGCTACTACGAGTCGCCTTGGCACGTGGGCGATGC TAGACCTCCGCGCGGCCGCG
Downstream 100 bases:
>100_bases GACCGTCACATGAAGGGATCGTCGCCCTTGGCGACGCGCATCCCCAGATCGATCAGGTTGGTCGCGGAGGTGTGCAGTCG TTCGCCGGCCTCCCTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MQTLSLADRPRRGGTKVVAMGWPEFGLLLAAGVLGGLTGSIAGLASVATYPALLLAGLPPVAANVTNTVSLVFNGIGSVL GSQPELRGQGGWLRRIVPAAALGGVAGAALLLSTPAEGFEKVVPILLGGSAVLILLPRRSAPAHPGHRPHAGLWASAAIL AICIYGGYFGAAAGVLLLALLLTTGTDTLAHANAGKNVVLGVANATAALVFAVFAPVHWVAVIPLGAGCLMGSRLGPVVV RRAPAGPMRILIGLAGVGLAVKLGVDAYR
Sequences:
>Translated_269_residues MQTLSLADRPRRGGTKVVAMGWPEFGLLLAAGVLGGLTGSIAGLASVATYPALLLAGLPPVAANVTNTVSLVFNGIGSVL GSQPELRGQGGWLRRIVPAAALGGVAGAALLLSTPAEGFEKVVPILLGGSAVLILLPRRSAPAHPGHRPHAGLWASAAIL AICIYGGYFGAAAGVLLLALLLTTGTDTLAHANAGKNVVLGVANATAALVFAVFAPVHWVAVIPLGAGCLMGSRLGPVVV RRAPAGPMRILIGLAGVGLAVKLGVDAYR >Mature_269_residues MQTLSLADRPRRGGTKVVAMGWPEFGLLLAAGVLGGLTGSIAGLASVATYPALLLAGLPPVAANVTNTVSLVFNGIGSVL GSQPELRGQGGWLRRIVPAAALGGVAGAALLLSTPAEGFEKVVPILLGGSAVLILLPRRSAPAHPGHRPHAGLWASAAIL AICIYGGYFGAAAGVLLLALLLTTGTDTLAHANAGKNVVLGVANATAALVFAVFAPVHWVAVIPLGAGCLMGSRLGPVVV RRAPAGPMRILIGLAGVGLAVKLGVDAYR
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26802; Mature: 26802
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLSLADRPRRGGTKVVAMGWPEFGLLLAAGVLGGLTGSIAGLASVATYPALLLAGLPP CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VAANVTNTVSLVFNGIGSVLGSQPELRGQGGWLRRIVPAAALGGVAGAALLLSTPAEGFE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KVVPILLGGSAVLILLPRRSAPAHPGHRPHAGLWASAAILAICIYGGYFGAAAGVLLLAL HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTTGTDTLAHANAGKNVVLGVANATAALVFAVFAPVHWVAVIPLGAGCLMGSRLGPVVV HHHCCCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEE RRAPAGPMRILIGLAGVGLAVKLGVDAYR EECCCCHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MQTLSLADRPRRGGTKVVAMGWPEFGLLLAAGVLGGLTGSIAGLASVATYPALLLAGLPP CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VAANVTNTVSLVFNGIGSVLGSQPELRGQGGWLRRIVPAAALGGVAGAALLLSTPAEGFE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KVVPILLGGSAVLILLPRRSAPAHPGHRPHAGLWASAAILAICIYGGYFGAAAGVLLLAL HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTTGTDTLAHANAGKNVVLGVANATAALVFAVFAPVHWVAVIPLGAGCLMGSRLGPVVV HHHCCCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEE RRAPAGPMRILIGLAGVGLAVKLGVDAYR EECCCCHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA