Click here to switch to the map view.

The map label for this gene is 108798665

Identifier: 108798665

GI number: 108798665

Start: 1835666

End: 1835938

Strand: Reverse

Name: 108798665

Synonym: Mmcs_1697

Alternate gene names: NA

Gene position: 1835938-1835666 (Counterclockwise)

Preceding gene: 108798678

Following gene: 108798664

Centisome position: 32.18

GC content: 66.3

Gene sequence:

>273_bases
GTGTTCGCCACCTTGACTCGCATCACGCCGTACACCATCGTGTCGCCGACCGTGCTGTCTTCGCAGATGCAGCGCATCCA
TCGTGAAGGAGTGGCCACCACGAGCGAGGAGATGTCGCTGGGTGCATGTTCGCTGGCGGTGCCGGTCATCCGCCAGACCG
ACGACGCCGTAGTCGCCGCGATCGCCGTGGTGGTACCGACGCTGAAGCGCGATCGTCAGCGGCTTCTCGGCGCCCTGCAG
GTCGCCGCGCGCGGCATTGGGCGACTGCTATGA

Upstream 100 bases:

>100_bases
TGTCCCGATTGTCAGCGCCGTCGGCAGCAGGCTGCCGATGCACTGCACCGGCGTTGGCAAGGTGCTGCTGGCCCACGCGC
CGGAGGACGTTAAAGACCGA

Downstream 100 bases:

>100_bases
CCCGTCAGGCGCCGTCGTAGCCGTCGCTCTGTGGGACAGAATCTCTCGAACGGGCAAGCTTTGGCGGCGGCCGCAACCTA
GGTCGAAGTGCCACACGTTA

Product: regulatory proteins IclR

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Regulatory Proteins IclR

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MFATLTRITPYTIVSPTVLSSQMQRIHREGVATTSEEMSLGACSLAVPVIRQTDDAVVAAIAVVVPTLKRDRQRLLGALQ
VAARGIGRLL

Sequences:

>Translated_90_residues
MFATLTRITPYTIVSPTVLSSQMQRIHREGVATTSEEMSLGACSLAVPVIRQTDDAVVAAIAVVVPTLKRDRQRLLGALQ
VAARGIGRLL
>Mature_90_residues
MFATLTRITPYTIVSPTVLSSQMQRIHREGVATTSEEMSLGACSLAVPVIRQTDDAVVAAIAVVVPTLKRDRQRLLGALQ
VAARGIGRLL

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9659; Mature: 9659

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFATLTRITPYTIVSPTVLSSQMQRIHREGVATTSEEMSLGACSLAVPVIRQTDDAVVAA
CCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCHHHHHH
IAVVVPTLKRDRQRLLGALQVAARGIGRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFATLTRITPYTIVSPTVLSSQMQRIHREGVATTSEEMSLGACSLAVPVIRQTDDAVVAA
CCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCHHHHHH
IAVVVPTLKRDRQRLLGALQVAARGIGRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA