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The map label for this gene is ydbO [H]

Identifier: 108798459

GI number: 108798459

Start: 1621769

End: 1622713

Strand: Direct

Name: ydbO [H]

Synonym: Mmcs_1489

Alternate gene names: 108798459

Gene position: 1621769-1622713 (Clockwise)

Preceding gene: 108798458

Following gene: 108798461

Centisome position: 28.42

GC content: 69.95

Gene sequence:

>945_bases
TTGAGTGCCGCGATTCGCGAGGTGTTCGCCCCGCACAGCCACGACGCCTCCGACAGCATCGACGATGCGCTGGAGTCCAG
CGCCGCAGGGGTTCGGGCGGTGAAGATCAGCCTGCTCGCGCTCGGTGCGACAGCGGTGGCGCAGTTGGTGATCGTGCTGG
TCTCCGGGTCGGTCGCGTTGCTCGCCGACACCATCCACAACTTCTCCGACGCCCTCACGGCCATCCCGCTGTGGGTCGCG
TTCGTGGTCGGCACCAAGGCGGCCACCCGGCGCTACACCTACGGATTCGGTCGGGCCGAGGACATCGCCGGGCTGTTCGT
CGTCGCGATGATCGCGCTGTCGGCGATCGTTGCGGGCGTGGAATCGATCCGCCGCCTCATCAACCCGGTGCCGATCGAGA
ACGTCGGGTGGGTGGCCGTCGCCGGTCTGGTCGGGTTCGTCGGCAACGAACTCGTTGCGCTCTACCGCATCCGGGTCGGG
CGCCGCATCGGCTCGGTCGCCCTGGTCGCCGACGGACTGCATGCCCGCACTGACGGATTCACCTCGCTGGCAGTGCTTTT
CGGCGCCGGCGGCGTCGCGCTGGGCTTCCCGCTCGCCGATCCCATCATCGGCCTGGTCATCACCGTTGCCATCCTCGCCG
TGCTGCGCACCGCGGTACGTGACGTCTTCCGCCGCCTCATGGACGGTGTGGAACCGGAGCTGGTCGACAAAGCCGAAGCC
GCACTCGCCGCCGAACCCGGCGTCACCGACGTGCGCGCCGTGCGGATGCGGTGGATCGGCCACCGGCTACACGCCGACGC
CGAGCTCGACATCGACCCCGCCACCAGCCTCGCCGACGCCCACCGCATCGCCCACGAGGCGGAGCACACCCTGACCCACG
CCGTTCCGAAACTGTCGTCCGCGCTGGTGCACGCCTACCCGGCGGAGCCGTCCCGGCGTCGCTAG

Upstream 100 bases:

>100_bases
CATCGAAGAACGGACGACGCGCATGACCCACGAACCCAAGCGCGCGCACCACAGCCACGATCACCACCGCGAGCACTCTC
ACGAGCATCACGGGGGCAAG

Downstream 100 bases:

>100_bases
CGGGTCAACCCCAGCAGCGGCGGGACAAGGTAGCGGCGCGCGAACGAGCGGGCGGCGTCGTCGTCACCGAGGGCGACGTT
CTGTGACGGCGTCAGCACGA

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSAAIREVFAPHSHDASDSIDDALESSAAGVRAVKISLLALGATAVAQLVIVLVSGSVALLADTIHNFSDALTAIPLWVA
FVVGTKAATRRYTYGFGRAEDIAGLFVVAMIALSAIVAGVESIRRLINPVPIENVGWVAVAGLVGFVGNELVALYRIRVG
RRIGSVALVADGLHARTDGFTSLAVLFGAGGVALGFPLADPIIGLVITVAILAVLRTAVRDVFRRLMDGVEPELVDKAEA
ALAAEPGVTDVRAVRMRWIGHRLHADAELDIDPATSLADAHRIAHEAEHTLTHAVPKLSSALVHAYPAEPSRRR

Sequences:

>Translated_314_residues
MSAAIREVFAPHSHDASDSIDDALESSAAGVRAVKISLLALGATAVAQLVIVLVSGSVALLADTIHNFSDALTAIPLWVA
FVVGTKAATRRYTYGFGRAEDIAGLFVVAMIALSAIVAGVESIRRLINPVPIENVGWVAVAGLVGFVGNELVALYRIRVG
RRIGSVALVADGLHARTDGFTSLAVLFGAGGVALGFPLADPIIGLVITVAILAVLRTAVRDVFRRLMDGVEPELVDKAEA
ALAAEPGVTDVRAVRMRWIGHRLHADAELDIDPATSLADAHRIAHEAEHTLTHAVPKLSSALVHAYPAEPSRRR
>Mature_313_residues
SAAIREVFAPHSHDASDSIDDALESSAAGVRAVKISLLALGATAVAQLVIVLVSGSVALLADTIHNFSDALTAIPLWVAF
VVGTKAATRRYTYGFGRAEDIAGLFVVAMIALSAIVAGVESIRRLINPVPIENVGWVAVAGLVGFVGNELVALYRIRVGR
RIGSVALVADGLHARTDGFTSLAVLFGAGGVALGFPLADPIIGLVITVAILAVLRTAVRDVFRRLMDGVEPELVDKAEAA
LAAEPGVTDVRAVRMRWIGHRLHADAELDIDPATSLADAHRIAHEAEHTLTHAVPKLSSALVHAYPAEPSRRR

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=259, Percent_Identity=26.2548262548263, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32977; Mature: 32845

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAIREVFAPHSHDASDSIDDALESSAAGVRAVKISLLALGATAVAQLVIVLVSGSVAL
CCHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LADTIHNFSDALTAIPLWVAFVVGTKAATRRYTYGFGRAEDIAGLFVVAMIALSAIVAGV
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ESIRRLINPVPIENVGWVAVAGLVGFVGNELVALYRIRVGRRIGSVALVADGLHARTDGF
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCHHCCCCH
TSLAVLFGAGGVALGFPLADPIIGLVITVAILAVLRTAVRDVFRRLMDGVEPELVDKAEA
HHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALAAEPGVTDVRAVRMRWIGHRLHADAELDIDPATSLADAHRIAHEAEHTLTHAVPKLSS
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVHAYPAEPSRRR
HHHHHCCCCCCCCC
>Mature Secondary Structure 
SAAIREVFAPHSHDASDSIDDALESSAAGVRAVKISLLALGATAVAQLVIVLVSGSVAL
CHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LADTIHNFSDALTAIPLWVAFVVGTKAATRRYTYGFGRAEDIAGLFVVAMIALSAIVAGV
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ESIRRLINPVPIENVGWVAVAGLVGFVGNELVALYRIRVGRRIGSVALVADGLHARTDGF
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCHHCCCCH
TSLAVLFGAGGVALGFPLADPIIGLVITVAILAVLRTAVRDVFRRLMDGVEPELVDKAEA
HHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALAAEPGVTDVRAVRMRWIGHRLHADAELDIDPATSLADAHRIAHEAEHTLTHAVPKLSS
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVHAYPAEPSRRR
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]