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The map label for this gene is 108798450

Identifier: 108798450

GI number: 108798450

Start: 1611584

End: 1612291

Strand: Reverse

Name: 108798450

Synonym: Mmcs_1480

Alternate gene names: NA

Gene position: 1612291-1611584 (Counterclockwise)

Preceding gene: 108798452

Following gene: 108798444

Centisome position: 28.26

GC content: 67.23

Gene sequence:

>708_bases
TTGCGCGGTGACCTGCCTGAGCACCACTCACCGACAGCGGCGCGGCTTCTCACTGCTGCCAACGACCTGCTGCTCGGCCG
CGGCGCGAAAGGCTTCACCGTCGCCGACGTGGCTGCGCGAGCTCATGTCGCGAAGGGCACGGTCTACCTCTACTGGCCGA
CCAAGGAGGATCTCCTCATCGGTCTGATCGGCCGCGGGTTCCTCCATGTGCTCGATGATTTGGTGCAACAACTCGGCGAC
GACCCCGCGCTCGCCCGGCCGTCGCGCTTCTGCCCGAGAATGCTTCACATCGCCGTCAGTCAACCGCTCGTCGCGGCGCT
GCAGCGCCACGATGACGACCTGCTCGGCATGCTCGCCGAGCATCCTCGCTCCGTCGCCCTCAACACCGCACTGGGGCCCG
GAGCCGTTCTGGAAGCGGTGATTCCCCTCTGGCGTCGCAACGGACTGGCTCGGACGGACTGGGACATCGCCGACCAGACC
TTCGCTCTGCACGCCCTCATCAGCGGCGTCGCATTGTCGCTCGCCGGGCCGTCGGCCGAGCCGACCGCTGTCGACGATCG
CTTGCGAGTGTTGGGCACTGCGGTCACAGCTCTCCTCGGTCCAGAGCGAGCCGGCCAGAAGCAGATTCGCAACACCGCGG
CCGGAATCATCGGCTTCCTGCGCAACGGTCAGTCCGCCGCGCTCCAACTCATCGAGCAGCCGGGATGA

Upstream 100 bases:

>100_bases
TAGCGCGACGGGTGACCAAATGACCGATTTGGTCAGTCTGTACATAGCGTAGTCGATCCCTGTGCGACCCGGGCGCCGAT
ATAGTCCACCGGTGAGCACC

Downstream 100 bases:

>100_bases
GACGGTTCGCCCGGTAGCTCCTGGCAAGCCGACCGCTGCGCAGTGCGAGTGGCCTTCGCCTTCGCCGCGGTGCTCGATTT
CGCCGCCGTGGAAGCGGCGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRGDLPEHHSPTAARLLTAANDLLLGRGAKGFTVADVAARAHVAKGTVYLYWPTKEDLLIGLIGRGFLHVLDDLVQQLGD
DPALARPSRFCPRMLHIAVSQPLVAALQRHDDDLLGMLAEHPRSVALNTALGPGAVLEAVIPLWRRNGLARTDWDIADQT
FALHALISGVALSLAGPSAEPTAVDDRLRVLGTAVTALLGPERAGQKQIRNTAAGIIGFLRNGQSAALQLIEQPG

Sequences:

>Translated_235_residues
MRGDLPEHHSPTAARLLTAANDLLLGRGAKGFTVADVAARAHVAKGTVYLYWPTKEDLLIGLIGRGFLHVLDDLVQQLGD
DPALARPSRFCPRMLHIAVSQPLVAALQRHDDDLLGMLAEHPRSVALNTALGPGAVLEAVIPLWRRNGLARTDWDIADQT
FALHALISGVALSLAGPSAEPTAVDDRLRVLGTAVTALLGPERAGQKQIRNTAAGIIGFLRNGQSAALQLIEQPG
>Mature_235_residues
MRGDLPEHHSPTAARLLTAANDLLLGRGAKGFTVADVAARAHVAKGTVYLYWPTKEDLLIGLIGRGFLHVLDDLVQQLGD
DPALARPSRFCPRMLHIAVSQPLVAALQRHDDDLLGMLAEHPRSVALNTALGPGAVLEAVIPLWRRNGLARTDWDIADQT
FALHALISGVALSLAGPSAEPTAVDDRLRVLGTAVTALLGPERAGQKQIRNTAAGIIGFLRNGQSAALQLIEQPG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24972; Mature: 24972

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGDLPEHHSPTAARLLTAANDLLLGRGAKGFTVADVAARAHVAKGTVYLYWPTKEDLLI
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHH
GLIGRGFLHVLDDLVQQLGDDPALARPSRFCPRMLHIAVSQPLVAALQRHDDDLLGMLAE
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HPRSVALNTALGPGAVLEAVIPLWRRNGLARTDWDIADQTFALHALISGVALSLAGPSAE
CCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PTAVDDRLRVLGTAVTALLGPERAGQKQIRNTAAGIIGFLRNGQSAALQLIEQPG
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MRGDLPEHHSPTAARLLTAANDLLLGRGAKGFTVADVAARAHVAKGTVYLYWPTKEDLLI
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHH
GLIGRGFLHVLDDLVQQLGDDPALARPSRFCPRMLHIAVSQPLVAALQRHDDDLLGMLAE
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HPRSVALNTALGPGAVLEAVIPLWRRNGLARTDWDIADQTFALHALISGVALSLAGPSAE
CCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PTAVDDRLRVLGTAVTALLGPERAGQKQIRNTAAGIIGFLRNGQSAALQLIEQPG
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA