| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798414
Identifier: 108798414
GI number: 108798414
Start: 1570490
End: 1571077
Strand: Direct
Name: 108798414
Synonym: Mmcs_1443
Alternate gene names: NA
Gene position: 1570490-1571077 (Clockwise)
Preceding gene: 108798413
Following gene: 108798415
Centisome position: 27.53
GC content: 65.99
Gene sequence:
>588_bases GTGGTTACGTCACCAAAAGCGCAGCGGCGCAACGAGGTGAAGCGAATCACGCCGCCAGTCACGGCGGCGTCGGATTGTCG CGGAAGCGCAGGTTGGCGACAGGTCACAAGGTGGCGACGACTTGATGGGCGCACCAGCAGGCGCTCATTCGCTGCTACAG TCGGCAACATTGTGAGCTACATCGACGCGACTTCCCGGCAGCGCCGACGCGCCCTGGTGGGTGCGTTGCTCGCGTTCTGG ATCGTCATCGTCGGAGCGGAGTGGGCGTTGCCCGGCACTGAGCCCCCGACTGTTCACGCACCCCACACACTGGCAGCCAG CGCCCCGGGGGCGCCGGTGTCGGCTGAGTTCGACCATCCACACGCTTCCACCAGCGATGGTGCCTGTTATCTCGACCTGT TGATGGACGTCATCGCGCCGCGAGGCGCGTTCATGCTGATCGCGCTGGCGTTGGCGGCCGCAGTTACCGTTGCGCCGACG CGTTGGCGCGACGGTGGCGTGGGTCCTATTCGTGGCCCACCGCGCATCCCTGTATGGCATCAGTCTGGCCGAGACATGCT CGTCCGGCTGTGTATCGCGCGTCGCTGA
Upstream 100 bases:
>100_bases TTCGCGATCGACTCGGTAAGCCCTCGATCACTTTAATTACCTACGTAGTAAAACCGTAGATGACCAGCGGCGGTGCTGCA TCGGCGCGCTGGCTCACCGC
Downstream 100 bases:
>100_bases TCGGCTAGCGCCAGGCCCGTTGGACAACGTGGCCGGTGACCGCTCATCCGATTCAGTAGCCGCGCCGATGCGTCGCGGCG TTCACAGAAGCGACTTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MVTSPKAQRRNEVKRITPPVTAASDCRGSAGWRQVTRWRRLDGRTSRRSFAATVGNIVSYIDATSRQRRRALVGALLAFW IVIVGAEWALPGTEPPTVHAPHTLAASAPGAPVSAEFDHPHASTSDGACYLDLLMDVIAPRGAFMLIALALAAAVTVAPT RWRDGGVGPIRGPPRIPVWHQSGRDMLVRLCIARR
Sequences:
>Translated_195_residues MVTSPKAQRRNEVKRITPPVTAASDCRGSAGWRQVTRWRRLDGRTSRRSFAATVGNIVSYIDATSRQRRRALVGALLAFW IVIVGAEWALPGTEPPTVHAPHTLAASAPGAPVSAEFDHPHASTSDGACYLDLLMDVIAPRGAFMLIALALAAAVTVAPT RWRDGGVGPIRGPPRIPVWHQSGRDMLVRLCIARR >Mature_195_residues MVTSPKAQRRNEVKRITPPVTAASDCRGSAGWRQVTRWRRLDGRTSRRSFAATVGNIVSYIDATSRQRRRALVGALLAFW IVIVGAEWALPGTEPPTVHAPHTLAASAPGAPVSAEFDHPHASTSDGACYLDLLMDVIAPRGAFMLIALALAAAVTVAPT RWRDGGVGPIRGPPRIPVWHQSGRDMLVRLCIARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21100; Mature: 21100
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSPKAQRRNEVKRITPPVTAASDCRGSAGWRQVTRWRRLDGRTSRRSFAATVGNIVSY CCCCCCHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IDATSRQRRRALVGALLAFWIVIVGAEWALPGTEPPTVHAPHTLAASAPGAPVSAEFDHP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HASTSDGACYLDLLMDVIAPRGAFMLIALALAAAVTVAPTRWRDGGVGPIRGPPRIPVWH CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC QSGRDMLVRLCIARR CCCHHHHHHHHHHCC >Mature Secondary Structure MVTSPKAQRRNEVKRITPPVTAASDCRGSAGWRQVTRWRRLDGRTSRRSFAATVGNIVSY CCCCCCHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IDATSRQRRRALVGALLAFWIVIVGAEWALPGTEPPTVHAPHTLAASAPGAPVSAEFDHP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HASTSDGACYLDLLMDVIAPRGAFMLIALALAAAVTVAPTRWRDGGVGPIRGPPRIPVWH CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC QSGRDMLVRLCIARR CCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA