| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798389
Identifier: 108798389
GI number: 108798389
Start: 1541329
End: 1542120
Strand: Reverse
Name: 108798389
Synonym: Mmcs_1418
Alternate gene names: NA
Gene position: 1542120-1541329 (Counterclockwise)
Preceding gene: 108798390
Following gene: 108798384
Centisome position: 27.03
GC content: 58.84
Gene sequence:
>792_bases ATGGCAGAACACGACGCAACCATTGACGAAGTGATCGGTGAACTTGAGCGCGCACTGCTCATCTCCCTCGTCGTCACGCT GACCTCACACAATGTCCTTATTCAAAAAGTTGAGGAATGGGAACGTCCACACCAACGATTCCTCCAAGGACTGGAACCAA CCGACGTCGGCCACTACCTCGACGTTAAGACGCTCACGTGGGCCGACACTAGTGGCCCAGGCCGCGTGCATATGCAAGAT CTGGTGTCCGCGATCAACGGGGGCGCCGAGATCTGGATGGCAGGCGCCGGCCGAGAAACCGTCAATAGCTACCCCGAAGC CCAGGCCGTCGCATACGCCCAATGGTTCAGCCACGCCTTCTCGCTGTGGGAGGAGCAGTTCCGCGGGAGGATCGCCGCCT GGTTCGACAAGCGGACCCCTGAACGCATCCGAGGCAGCGACATCCGCAGCGACTACTTTGGAGACATCCGCCTTATCCGC AACGACTTTGTCCACAATAAAGGCATCTGCAAAGACTCCGCGCAACTCAAACGGCTCGAATATGGACTCACCCGACGTCG GCCAATCGAGATCACCCCGGAGCAGATGTTGTCGCTTATCGACCTCTTCCCTCGCGACGAATTACGAAGTGCGCCAACAC CACTGCCCCCAGGAGACACCGTGAGGGTCCCCGGCAAAGTGAACCCACACGTGCTGGAAGACGTCCAGACGCATGCTCAG AAGCTTGGACTCAACGACAGCCAGCTTCTCGAAGCGGCACTTTCTGAGTGGTTGGCGCGTAACGGCTCCTGA
Upstream 100 bases:
>100_bases CTCACCGCTTAACCCACCGGATCACGCAGCACTACACCACTTCCCGGGACTTGACCTCATCGATGCCATCGAAGATGCAC TGCCCCTATTGGAAGAGCAG
Downstream 100 bases:
>100_bases CGACGCTGATCTCGATAAGGGATCCTCAGAACCCTCGGAGAATCCGGATAAAGAGTGATACGCAAACTTGAGATCCAAAA GTGTTCGATCACGCACATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MAEHDATIDEVIGELERALLISLVVTLTSHNVLIQKVEEWERPHQRFLQGLEPTDVGHYLDVKTLTWADTSGPGRVHMQD LVSAINGGAEIWMAGAGRETVNSYPEAQAVAYAQWFSHAFSLWEEQFRGRIAAWFDKRTPERIRGSDIRSDYFGDIRLIR NDFVHNKGICKDSAQLKRLEYGLTRRRPIEITPEQMLSLIDLFPRDELRSAPTPLPPGDTVRVPGKVNPHVLEDVQTHAQ KLGLNDSQLLEAALSEWLARNGS
Sequences:
>Translated_263_residues MAEHDATIDEVIGELERALLISLVVTLTSHNVLIQKVEEWERPHQRFLQGLEPTDVGHYLDVKTLTWADTSGPGRVHMQD LVSAINGGAEIWMAGAGRETVNSYPEAQAVAYAQWFSHAFSLWEEQFRGRIAAWFDKRTPERIRGSDIRSDYFGDIRLIR NDFVHNKGICKDSAQLKRLEYGLTRRRPIEITPEQMLSLIDLFPRDELRSAPTPLPPGDTVRVPGKVNPHVLEDVQTHAQ KLGLNDSQLLEAALSEWLARNGS >Mature_262_residues AEHDATIDEVIGELERALLISLVVTLTSHNVLIQKVEEWERPHQRFLQGLEPTDVGHYLDVKTLTWADTSGPGRVHMQDL VSAINGGAEIWMAGAGRETVNSYPEAQAVAYAQWFSHAFSLWEEQFRGRIAAWFDKRTPERIRGSDIRSDYFGDIRLIRN DFVHNKGICKDSAQLKRLEYGLTRRRPIEITPEQMLSLIDLFPRDELRSAPTPLPPGDTVRVPGKVNPHVLEDVQTHAQK LGLNDSQLLEAALSEWLARNGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29753; Mature: 29622
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHDATIDEVIGELERALLISLVVTLTSHNVLIQKVEEWERPHQRFLQGLEPTDVGHYL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE DVKTLTWADTSGPGRVHMQDLVSAINGGAEIWMAGAGRETVNSYPEAQAVAYAQWFSHAF ECEEEEECCCCCCCCEEHHHHHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHH SLWEEQFRGRIAAWFDKRTPERIRGSDIRSDYFGDIRLIRNDFVHNKGICKDSAQLKRLE HHHHHHHCCHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH YGLTRRRPIEITPEQMLSLIDLFPRDELRSAPTPLPPGDTVRVPGKVNPHVLEDVQTHAQ HHHCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH KLGLNDSQLLEAALSEWLARNGS HHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AEHDATIDEVIGELERALLISLVVTLTSHNVLIQKVEEWERPHQRFLQGLEPTDVGHYL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE DVKTLTWADTSGPGRVHMQDLVSAINGGAEIWMAGAGRETVNSYPEAQAVAYAQWFSHAF ECEEEEECCCCCCCCEEHHHHHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHH SLWEEQFRGRIAAWFDKRTPERIRGSDIRSDYFGDIRLIRNDFVHNKGICKDSAQLKRLE HHHHHHHCCHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH YGLTRRRPIEITPEQMLSLIDLFPRDELRSAPTPLPPGDTVRVPGKVNPHVLEDVQTHAQ HHHCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH KLGLNDSQLLEAALSEWLARNGS HHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA