Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

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The map label for this gene is 108798351

Identifier: 108798351

GI number: 108798351

Start: 1496254

End: 1496547

Strand: Direct

Name: 108798351

Synonym: Mmcs_1380

Alternate gene names: NA

Gene position: 1496254-1496547 (Clockwise)

Preceding gene: 108798350

Following gene: 108798352

Centisome position: 26.23

GC content: 66.67

Gene sequence:

>294_bases
GTGAGTGACGAAGAGCGCTGGACCCCGCCGGTCGGCCCGGTCGACCCGGAGCATCCCGAATGCGCCGCCGTCATCGCGGA
GGTGTGGACGCTGCTAGACGGCGAGTGCACCCCGGAGACGCGTGACAAGCTCAAGCACCATCTCGAGGAATGCCCCGCGT
GCCTGCGTCATTACGGCGTGGAGGAACGGGTCAAACGCCTCATCGCCGCCAAGTGCGGTGGGGAGAAGGCTCCGGACCGG
TTACGTGAGCGTCTGCGCATCGAGATCAGCCGCACCACGATCTACCGCAGCTGA

Upstream 100 bases:

>100_bases
GGTTGCATCGTGGCCGCAAGCAGCTCCGTGAGCTGCTCGCCGATGTCGCCCGAGACCGCGGGTTCCTCCGCGGTGCGCAA
GCGCCCGAGGAGGTGTCGTC

Downstream 100 bases:

>100_bases
CTCCAGGTACGACGAAACTACGGTTGTTGACGGATTTCGCTCGAGATCCGTCAACAACCGTAGTTTCGTACTACCTGCAG
TGCGGTGAGGGTCAGCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Anti-Sigma Factor RshA; Anti Sigma Factor; Anti-Sigma Factor Family Protein

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSDEERWTPPVGPVDPEHPECAAVIAEVWTLLDGECTPETRDKLKHHLEECPACLRHYGVEERVKRLIAAKCGGEKAPDR
LRERLRIEISRTTIYRS

Sequences:

>Translated_97_residues
MSDEERWTPPVGPVDPEHPECAAVIAEVWTLLDGECTPETRDKLKHHLEECPACLRHYGVEERVKRLIAAKCGGEKAPDR
LRERLRIEISRTTIYRS
>Mature_96_residues
SDEERWTPPVGPVDPEHPECAAVIAEVWTLLDGECTPETRDKLKHHLEECPACLRHYGVEERVKRLIAAKCGGEKAPDRL
RERLRIEISRTTIYRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11148; Mature: 11017

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEERWTPPVGPVDPEHPECAAVIAEVWTLLDGECTPETRDKLKHHLEECPACLRHYGV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCH
EERVKRLIAAKCGGEKAPDRLRERLRIEISRTTIYRS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDEERWTPPVGPVDPEHPECAAVIAEVWTLLDGECTPETRDKLKHHLEECPACLRHYGV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCH
EERVKRLIAAKCGGEKAPDRLRERLRIEISRTTIYRS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA