| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798205
Identifier: 108798205
GI number: 108798205
Start: 1332556
End: 1333824
Strand: Reverse
Name: 108798205
Synonym: Mmcs_1234
Alternate gene names: NA
Gene position: 1333824-1332556 (Counterclockwise)
Preceding gene: 108798206
Following gene: 108798201
Centisome position: 23.38
GC content: 69.74
Gene sequence:
>1269_bases ATGGCTGCTGACATCGTGCCGGTTCGGCTCGGGCTGACCAAAGGCGACCTCTACACACTGTGGGCTCCGCGCTGGCGGGA CGCCGGTGACGAATGGGAGGCCTTCCTCGGCAAGGACGAGGACCTCTACGCCTTCGAGTCGGTGGCCGATCTGGTGGCCT TCGTGCGGACCGACACCGACCACGACCTGACCGATCACCCCGCCTGGGAGAAGTTGACCGAGGCCTCCGCGCACCGGCTC AAGCCCACCGAGGACCACGAGTACGACCTCGTCGGGGTGCCGGAGACGGCAGCCGAGAAGGCGAGCGAGACCGTCGTCGG CACCCTGCACCGCACGCTCGCGATCGCCGCGTCGATCGGTTCGGTGTGCGATCTGCCCGCGGTGACGAAGTTCTTCAACG GCAACCCGCAGCTGGGTTCGGTGGGCGGCGGTGTCGAGGCGTTCAAGGGCCGTAGCGGCCGCAAACGCTGGGCTGAGATC GAAGCGGTGATCGCCCGCAGCTGGGACGGTGTGCTCGACGCGATCGACGAGATCGTCACCACTCCCGACGTGGACGCGGC CGCCTCGGAGAAGGCGGCCGCCGAACTCGAAGAGCCGGCACCCGAGGAGGGCGAGGACAACGACGCGGCGGCCACCGCCG AGGAGACCGAGGACGCCGAACCGACGGCCACCGAGTCCGACGCGCTCGAATCCCCGGCCGCCTCAGCGGTTCTCGGCAGC GACGAGGACTTCTGGCTCAAGGTCGGCATCGACCCGGTGCGGCTGATGACCCGCTCGGGCACCTTCTACACGCTGCGCTG CTACCTCGGGGACGACCCGGTGTTCCTCGGCCGCAACGGGCGCATCAGCGTCTTCGGCTCCGAGCGCGCGCTGGCCCGCT ACCTGGCCGACGAGCACGACCACGACCTGTCCGATCTGCCGACCTACGACGACATCCGCACCGCGGCCACCGACGGTTCA CTCGAGGTCGAGGTGATCGACGACAACGTCTACGTGCTCAGCGGGCTGGCCGACGACATCGCCGACGGCCCCGACACGAT CGACCGCGACCAGCTCGACCTGGCGCTCGAACTGCTCCGCGACGTCGGCCACTACGCCGAGGACAACACCGTCGAGAAGA CGCTGGACCCCGCCACCGCACTCGGCGCGTTCGTCACCCACGCGCTCGACCCGGATGCCGCCGACCGTCCCGAACCGCCC TACGCCCAGGCGGTCGAGCAGTGGGAGGCGCTGGAGGCGTTCGTCGAGTCCCGCCTGCGCCAGGAGTGA
Upstream 100 bases:
>100_bases ATCGTCGAGACCGTACAGGCGGCGGGCCGCGAGGTGTCCGCACAGCGGCTCGCGGTGCTCGGCGACTTGGTCGCAGACCT CGGTCGTTAGGCTGTGCCGC
Downstream 100 bases:
>100_bases CGCGTCACCCGGCGAGCACGGCGTAACGGGGTTTGATCACGTCGTCGATGAGCGCGAGCCGCTCATCGAACGGGATGAAG GACGACTTCATCGCGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MAADIVPVRLGLTKGDLYTLWAPRWRDAGDEWEAFLGKDEDLYAFESVADLVAFVRTDTDHDLTDHPAWEKLTEASAHRL KPTEDHEYDLVGVPETAAEKASETVVGTLHRTLAIAASIGSVCDLPAVTKFFNGNPQLGSVGGGVEAFKGRSGRKRWAEI EAVIARSWDGVLDAIDEIVTTPDVDAAASEKAAAELEEPAPEEGEDNDAAATAEETEDAEPTATESDALESPAASAVLGS DEDFWLKVGIDPVRLMTRSGTFYTLRCYLGDDPVFLGRNGRISVFGSERALARYLADEHDHDLSDLPTYDDIRTAATDGS LEVEVIDDNVYVLSGLADDIADGPDTIDRDQLDLALELLRDVGHYAEDNTVEKTLDPATALGAFVTHALDPDAADRPEPP YAQAVEQWEALEAFVESRLRQE
Sequences:
>Translated_422_residues MAADIVPVRLGLTKGDLYTLWAPRWRDAGDEWEAFLGKDEDLYAFESVADLVAFVRTDTDHDLTDHPAWEKLTEASAHRL KPTEDHEYDLVGVPETAAEKASETVVGTLHRTLAIAASIGSVCDLPAVTKFFNGNPQLGSVGGGVEAFKGRSGRKRWAEI EAVIARSWDGVLDAIDEIVTTPDVDAAASEKAAAELEEPAPEEGEDNDAAATAEETEDAEPTATESDALESPAASAVLGS DEDFWLKVGIDPVRLMTRSGTFYTLRCYLGDDPVFLGRNGRISVFGSERALARYLADEHDHDLSDLPTYDDIRTAATDGS LEVEVIDDNVYVLSGLADDIADGPDTIDRDQLDLALELLRDVGHYAEDNTVEKTLDPATALGAFVTHALDPDAADRPEPP YAQAVEQWEALEAFVESRLRQE >Mature_421_residues AADIVPVRLGLTKGDLYTLWAPRWRDAGDEWEAFLGKDEDLYAFESVADLVAFVRTDTDHDLTDHPAWEKLTEASAHRLK PTEDHEYDLVGVPETAAEKASETVVGTLHRTLAIAASIGSVCDLPAVTKFFNGNPQLGSVGGGVEAFKGRSGRKRWAEIE AVIARSWDGVLDAIDEIVTTPDVDAAASEKAAAELEEPAPEEGEDNDAAATAEETEDAEPTATESDALESPAASAVLGSD EDFWLKVGIDPVRLMTRSGTFYTLRCYLGDDPVFLGRNGRISVFGSERALARYLADEHDHDLSDLPTYDDIRTAATDGSL EVEVIDDNVYVLSGLADDIADGPDTIDRDQLDLALELLRDVGHYAEDNTVEKTLDPATALGAFVTHALDPDAADRPEPPY AQAVEQWEALEAFVESRLRQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45801; Mature: 45670
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADIVPVRLGLTKGDLYTLWAPRWRDAGDEWEAFLGKDEDLYAFESVADLVAFVRTDTD CCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC HDLTDHPAWEKLTEASAHRLKPTEDHEYDLVGVPETAAEKASETVVGTLHRTLAIAASIG CCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC SVCDLPAVTKFFNGNPQLGSVGGGVEAFKGRSGRKRWAEIEAVIARSWDGVLDAIDEIVT CHHCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC TPDVDAAASEKAAAELEEPAPEEGEDNDAAATAEETEDAEPTATESDALESPAASAVLGS CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCCCCHHEECC DEDFWLKVGIDPVRLMTRSGTFYTLRCYLGDDPVFLGRNGRISVFGSERALARYLADEHD CCCEEEEECCCHHHHEECCCCEEEEEEEECCCCEEECCCCEEEEEECHHHHHHHHHCCCC HDLSDLPTYDDIRTAATDGSLEVEVIDDNVYVLSGLADDIADGPDTIDRDQLDLALELLR CCHHCCCCHHHHHHHCCCCCEEEEEECCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHH DVGHYAEDNTVEKTLDPATALGAFVTHALDPDAADRPEPPYAQAVEQWEALEAFVESRLR HHHCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QE CC >Mature Secondary Structure AADIVPVRLGLTKGDLYTLWAPRWRDAGDEWEAFLGKDEDLYAFESVADLVAFVRTDTD CCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC HDLTDHPAWEKLTEASAHRLKPTEDHEYDLVGVPETAAEKASETVVGTLHRTLAIAASIG CCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC SVCDLPAVTKFFNGNPQLGSVGGGVEAFKGRSGRKRWAEIEAVIARSWDGVLDAIDEIVT CHHCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC TPDVDAAASEKAAAELEEPAPEEGEDNDAAATAEETEDAEPTATESDALESPAASAVLGS CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCCCCHHEECC DEDFWLKVGIDPVRLMTRSGTFYTLRCYLGDDPVFLGRNGRISVFGSERALARYLADEHD CCCEEEEECCCHHHHEECCCCEEEEEEEECCCCEEECCCCEEEEEECHHHHHHHHHCCCC HDLSDLPTYDDIRTAATDGSLEVEVIDDNVYVLSGLADDIADGPDTIDRDQLDLALELLR CCHHCCCCHHHHHHHCCCCCEEEEEECCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHH DVGHYAEDNTVEKTLDPATALGAFVTHALDPDAADRPEPPYAQAVEQWEALEAFVESRLR HHHCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA