| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798168
Identifier: 108798168
GI number: 108798168
Start: 1294344
End: 1295162
Strand: Direct
Name: 108798168
Synonym: Mmcs_1197
Alternate gene names: NA
Gene position: 1294344-1295162 (Clockwise)
Preceding gene: 108798164
Following gene: 108798175
Centisome position: 22.69
GC content: 69.35
Gene sequence:
>819_bases ATGCCCCGCGACACCATGAGCCGCACCGTCGGCGCCGAACTCGAGATCGAGGTCACCGCACCCACCACGCTCGAGTTCCA GATCGCGCTCGCCGCGCATCCGGGCGCCGACATCACCGAGGCGCTGACGTTCCGCCACGACGGCACATCCGTCGAGGCGC AGGAGATGATCGGCGAACACGGCACCCGCATCCACAAATTCGCCGCCGCGCCCGGCACGGTGACCGCGTCCTACCAGGCG ACTATTCGGGGTTTCGCGGCGCCGCCCGAGGTCCGCGACATCGACCTGTCGACCTATCTGCGACCCAGTCGCTACGCCGA GGCGGACAAGTTCTTCGGTTTCGCCGCAACGGAATTCGGCGACTTCACCGACTCCGAGGCGCTACTGGAGCGGGTGTCGT CGTGGGTCGGCGCCCGTCTCGACTACGTCCCCGGGTCGAGCGATCCCATCGACGGCGCCGCGGACACGCTGCTGGCCGGC GCGGGCGTCTGCCGTGACTATGCCCACCTGGTCATCGCGATGCTGCGCGCGGTCAACGTCCCGGCCCGCCTGGTCTCCGT CTACGCACCCGGGTGCAGCCCGATGGACTTCCACGCCGTCGCCGAGGCCTACGTCGAGGGGCAGTGGCGGGTGGTCGACG CGACGTGTCTGGCGCCGCGACAGTCCATGGTGCGCATCGCGACCGGGCGGGACGCCGCCGACACCGCGTTCCTCGACAAC CACGACGGCTCCATCACGTTGCAGAACATGACCGTCACCGCGGTCGTCGACGGGGAGTTGCCGCGGGATTCGGTGTCCGA CCTGGTCACCTTGCACTGA
Upstream 100 bases:
>100_bases TTCGATCAAATCCCGCCAACTCGACACGCATGTGATTCACCTCCGGCGCGTCACCGGCCCTCGCGCTGCGGGGACGTCGG ATCGAGACGAGACTGTGCCG
Downstream 100 bases:
>100_bases GTCGTTGTGCACGGCCGCCCAGCCAGTGCACCAGTCGGTCGTAGATCTCCGGATGGTTGAGCAGATCGAAATGATGCAGA CCGCTCATCACCAGACCGTT
Product: transglutaminase-like protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase Family Protein; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Cysteine Protease Transglutaminase-Like Protein; Transglutaminase-Like S Cysteine Proteases; Protease Transglutaminase-Like; Cysteine Protease; Transglutaminase/Protease-Like Protein; Transglutaminase/Protease; Transglutaminase-Like S Cysteine Protease; Transglutaminase-Like Cysteine Protease; Cystein Protease
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MPRDTMSRTVGAELEIEVTAPTTLEFQIALAAHPGADITEALTFRHDGTSVEAQEMIGEHGTRIHKFAAAPGTVTASYQA TIRGFAAPPEVRDIDLSTYLRPSRYAEADKFFGFAATEFGDFTDSEALLERVSSWVGARLDYVPGSSDPIDGAADTLLAG AGVCRDYAHLVIAMLRAVNVPARLVSVYAPGCSPMDFHAVAEAYVEGQWRVVDATCLAPRQSMVRIATGRDAADTAFLDN HDGSITLQNMTVTAVVDGELPRDSVSDLVTLH
Sequences:
>Translated_272_residues MPRDTMSRTVGAELEIEVTAPTTLEFQIALAAHPGADITEALTFRHDGTSVEAQEMIGEHGTRIHKFAAAPGTVTASYQA TIRGFAAPPEVRDIDLSTYLRPSRYAEADKFFGFAATEFGDFTDSEALLERVSSWVGARLDYVPGSSDPIDGAADTLLAG AGVCRDYAHLVIAMLRAVNVPARLVSVYAPGCSPMDFHAVAEAYVEGQWRVVDATCLAPRQSMVRIATGRDAADTAFLDN HDGSITLQNMTVTAVVDGELPRDSVSDLVTLH >Mature_271_residues PRDTMSRTVGAELEIEVTAPTTLEFQIALAAHPGADITEALTFRHDGTSVEAQEMIGEHGTRIHKFAAAPGTVTASYQAT IRGFAAPPEVRDIDLSTYLRPSRYAEADKFFGFAATEFGDFTDSEALLERVSSWVGARLDYVPGSSDPIDGAADTLLAGA GVCRDYAHLVIAMLRAVNVPARLVSVYAPGCSPMDFHAVAEAYVEGQWRVVDATCLAPRQSMVRIATGRDAADTAFLDNH DGSITLQNMTVTAVVDGELPRDSVSDLVTLH
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29146; Mature: 29015
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRDTMSRTVGAELEIEVTAPTTLEFQIALAAHPGADITEALTFRHDGTSVEAQEMIGEH CCCHHHHHHCCCEEEEEEECCCEEEEEEEEEECCCCCHHHHHEECCCCCCCHHHHHHHHC GTRIHKFAAAPGTVTASYQATIRGFAAPPEVRDIDLSTYLRPSRYAEADKFFGFAATEFG CCEEEEEECCCCCEEEEHHEEEECCCCCCCCEECCHHHHCCCHHHCCHHHHCCEEHHHCC DFTDSEALLERVSSWVGARLDYVPGSSDPIDGAADTLLAGAGVCRDYAHLVIAMLRAVNV CCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PARLVSVYAPGCSPMDFHAVAEAYVEGQWRVVDATCLAPRQSMVRIATGRDAADTAFLDN CHHHHEEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHEEEEECCCCCCCCCEEEC HDGSITLQNMTVTAVVDGELPRDSVSDLVTLH CCCEEEEEEEEEEEEECCCCCCCCHHHHEECC >Mature Secondary Structure PRDTMSRTVGAELEIEVTAPTTLEFQIALAAHPGADITEALTFRHDGTSVEAQEMIGEH CCHHHHHHCCCEEEEEEECCCEEEEEEEEEECCCCCHHHHHEECCCCCCCHHHHHHHHC GTRIHKFAAAPGTVTASYQATIRGFAAPPEVRDIDLSTYLRPSRYAEADKFFGFAATEFG CCEEEEEECCCCCEEEEHHEEEECCCCCCCCEECCHHHHCCCHHHCCHHHHCCEEHHHCC DFTDSEALLERVSSWVGARLDYVPGSSDPIDGAADTLLAGAGVCRDYAHLVIAMLRAVNV CCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PARLVSVYAPGCSPMDFHAVAEAYVEGQWRVVDATCLAPRQSMVRIATGRDAADTAFLDN CHHHHEEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHEEEEECCCCCCCCCEEEC HDGSITLQNMTVTAVVDGELPRDSVSDLVTLH CCCEEEEEEEEEEEEECCCCCCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA