| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798163
Identifier: 108798163
GI number: 108798163
Start: 1291784
End: 1292365
Strand: Direct
Name: 108798163
Synonym: Mmcs_1192
Alternate gene names: NA
Gene position: 1291784-1292365 (Clockwise)
Preceding gene: 108798162
Following gene: 108798164
Centisome position: 22.64
GC content: 67.18
Gene sequence:
>582_bases GTGGCCTACGAGCACTCTGACACGCGGCGCTCGAGCGCGACGAAGATCGTCGTCTCCGGCGGATTCGGCGCCGGGAAGAC GACGTTCGTGGGCGCGGTGTCGGAGATCATGCCGCTGCGCACCGAGGCGCTGGTCACCAACGCCTCGGCCGGAGTCGACG GCCTCGAGGGCACCCCCGACAAGCGCACCACCACCGTGGCGATGGACTTCGGCCGCATCACGCTGGCCGACGACCTGGTC CTGTACTTGTTCGGCACACCGGGGCAGCGGCGGTTCTGGTTCATGTGGGACGACCTGATCCGCGGTGCGATCGGCGCGAT CATCCTCGTCGACGTCCGCCGCCTGCAGGACAGCTTCGCCGCGGTCGACTTCTTCGAGGCGCGAAACCTGCCGTTCCTGG TCGCCATCAACGAATTCGACGGCGCTCCAAGGCATTCCACCGATGCGGTGCGAAAGGCGTTGGCGCTGCCAGCCCACATC CCGGTGATCACCGTCGACGCCAGAAGCCGCGAGTCGGCCAAGGCCGCGCTCATCGCGATCACCGAATACTCCCTCAACAG CCTTTCGGCTCTGCCGGGTTGA
Upstream 100 bases:
>100_bases GTGGGGGACCTGGTGACGCAGGGTTATCTACGGGTGCACGCCACCCTCGACCAATCGGCGACCTCCGACGAGCGCCGCGA ACTCATAGGAAGGACACTGC
Downstream 100 bases:
>100_bases CGATGGCGGAGTGGAACGACGAGGAGTTCATCGGCCGGGACTTCCGTGACGAGGACCTGAGCCGGCTGCGCACCGAGCGG GTGGTGTTCGACGGCTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAYEHSDTRRSSATKIVVSGGFGAGKTTFVGAVSEIMPLRTEALVTNASAGVDGLEGTPDKRTTTVAMDFGRITLADDLV LYLFGTPGQRRFWFMWDDLIRGAIGAIILVDVRRLQDSFAAVDFFEARNLPFLVAINEFDGAPRHSTDAVRKALALPAHI PVITVDARSRESAKAALIAITEYSLNSLSALPG
Sequences:
>Translated_193_residues MAYEHSDTRRSSATKIVVSGGFGAGKTTFVGAVSEIMPLRTEALVTNASAGVDGLEGTPDKRTTTVAMDFGRITLADDLV LYLFGTPGQRRFWFMWDDLIRGAIGAIILVDVRRLQDSFAAVDFFEARNLPFLVAINEFDGAPRHSTDAVRKALALPAHI PVITVDARSRESAKAALIAITEYSLNSLSALPG >Mature_192_residues AYEHSDTRRSSATKIVVSGGFGAGKTTFVGAVSEIMPLRTEALVTNASAGVDGLEGTPDKRTTTVAMDFGRITLADDLVL YLFGTPGQRRFWFMWDDLIRGAIGAIILVDVRRLQDSFAAVDFFEARNLPFLVAINEFDGAPRHSTDAVRKALALPAHIP VITVDARSRESAKAALIAITEYSLNSLSALPG
Specific function: Unknown
COG id: COG2229
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20787; Mature: 20656
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEHSDTRRSSATKIVVSGGFGAGKTTFVGAVSEIMPLRTEALVTNASAGVDGLEGTPD CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCC KRTTTVAMDFGRITLADDLVLYLFGTPGQRRFWFMWDDLIRGAIGAIILVDVRRLQDSFA CCEEEEEEECCEEEEECCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH AVDFFEARNLPFLVAINEFDGAPRHSTDAVRKALALPAHIPVITVDARSRESAKAALIAI HHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEE TEYSLNSLSALPG EECCCCCCCCCCC >Mature Secondary Structure AYEHSDTRRSSATKIVVSGGFGAGKTTFVGAVSEIMPLRTEALVTNASAGVDGLEGTPD CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCC KRTTTVAMDFGRITLADDLVLYLFGTPGQRRFWFMWDDLIRGAIGAIILVDVRRLQDSFA CCEEEEEEECCEEEEECCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH AVDFFEARNLPFLVAINEFDGAPRHSTDAVRKALALPAHIPVITVDARSRESAKAALIAI HHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEE TEYSLNSLSALPG EECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA