| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is ypbQ [H]
Identifier: 108798033
GI number: 108798033
Start: 1156298
End: 1156807
Strand: Direct
Name: ypbQ [H]
Synonym: Mmcs_1060
Alternate gene names: 108798033
Gene position: 1156298-1156807 (Clockwise)
Preceding gene: 108798032
Following gene: 108798034
Centisome position: 20.27
GC content: 69.41
Gene sequence:
>510_bases ATGGTCTGGTACGGCTTGTTGATCGCCGCGGTCGGTGTCGAACGGCTGGGCGAACTCGTTGTCGCAGAACGCAACCGACG CTGGAGCCGGCAACGCGGCGGTATCGAGTACGGTGCCCGGCACTACCCGGTGATGGTGGTGCTGCACACCGGTCTGCTGG CCGGGTGCCTGCTCGAGGTCGCCGCACTGCATCGGCCGTTCACACCCGTGCTGGGCTTCCCCATGCTCGCGCTGGTGATC GCCGCACAGGCGCTGCGGTGGTGGTGCATCACCACCCTCGGCTGGCAGTGGAACACCAGGGTCATCGTCGTCCCCGGCGC GTCGCGGGTCACCGGCGGACCGTACCGGCTCATCCCGCATCCCAACTACGTCGCGGTGGTCGTCGAGGGTTTCGCCCTCC CACTGGTGCACGGCGCCTGGATCACCGCGCTGGTGTTCACCGCCCTCAACGCCGCCCTGCTCCGGACGCGGGTCCGCGTG GAGAACGCCGCGCTCGCGGGGTTGCGATGA
Upstream 100 bases:
>100_bases CCAAACACCCGCCCGCGGACACCCCCGGGCTGATGATGGCGATGGGCCCGGGCTTCTGCTCCGAACTCGTCCTGTTGCGC TGGCGCTGACGGCCGGTCCC
Downstream 100 bases:
>100_bases TCGACCTCCTCGTCGCCGGCGGCGGCCCGGCCGGACTGGCCACCGCCGTGTACGGCGCCAGGGCCGGACTCGACGTCGCG GTGATCGAGCGCCGTCCCGG
Product: isoprenylcysteine carboxyl methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MVWYGLLIAAVGVERLGELVVAERNRRWSRQRGGIEYGARHYPVMVVLHTGLLAGCLLEVAALHRPFTPVLGFPMLALVI AAQALRWWCITTLGWQWNTRVIVVPGASRVTGGPYRLIPHPNYVAVVVEGFALPLVHGAWITALVFTALNAALLRTRVRV ENAALAGLR
Sequences:
>Translated_169_residues MVWYGLLIAAVGVERLGELVVAERNRRWSRQRGGIEYGARHYPVMVVLHTGLLAGCLLEVAALHRPFTPVLGFPMLALVI AAQALRWWCITTLGWQWNTRVIVVPGASRVTGGPYRLIPHPNYVAVVVEGFALPLVHGAWITALVFTALNAALLRTRVRV ENAALAGLR >Mature_169_residues MVWYGLLIAAVGVERLGELVVAERNRRWSRQRGGIEYGARHYPVMVVLHTGLLAGCLLEVAALHRPFTPVLGFPMLALVI AAQALRWWCITTLGWQWNTRVIVVPGASRVTGGPYRLIPHPNYVAVVVEGFALPLVHGAWITALVFTALNAALLRTRVRV ENAALAGLR
Specific function: Unknown
COG id: COG1755
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007269 [H]
Pfam domain/function: PF04140 ICMT [H]
EC number: NA
Molecular weight: Translated: 18592; Mature: 18592
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWYGLLIAAVGVERLGELVVAERNRRWSRQRGGIEYGARHYPVMVVLHTGLLAGCLLEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AALHRPFTPVLGFPMLALVIAAQALRWWCITTLGWQWNTRVIVVPGASRVTGGPYRLIPH HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCCEEECCC PNYVAVVVEGFALPLVHGAWITALVFTALNAALLRTRVRVENAALAGLR CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVWYGLLIAAVGVERLGELVVAERNRRWSRQRGGIEYGARHYPVMVVLHTGLLAGCLLEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AALHRPFTPVLGFPMLALVIAAQALRWWCITTLGWQWNTRVIVVPGASRVTGGPYRLIPH HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCCEEECCC PNYVAVVVEGFALPLVHGAWITALVFTALNAALLRTRVRVENAALAGLR CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377; 8396117 [H]