Click here to switch to the map view.

The map label for this gene is 108798031

Identifier: 108798031

GI number: 108798031

Start: 1154603

End: 1155166

Strand: Direct

Name: 108798031

Synonym: Mmcs_1058

Alternate gene names: NA

Gene position: 1154603-1155166 (Clockwise)

Preceding gene: 108798030

Following gene: 108798032

Centisome position: 20.24

GC content: 70.39

Gene sequence:

>564_bases
ATGGGCACGGAGCGAACCCGCAACGCCCCGCAGACGCGCGCCGATATCCTCGCCGCCGCCCGGCGGCGCTTCGGGGCCGA
CGGCTACCAGCGCACCACCTTGCGCGGGGTGGCCGCCGATGTCGGGGTGGATGCGGCGCTGATCATCCGGTACTTCGGCA
GCAAACAGGAATTGTTCGCCGAGGCAGCCGAATTCAGGATCGACCTGCCCGACCTCGGCACCGTCGAACCCGACCGGATC
GCCGATGTGCTGCTGTCCCGTTTCTTCGCGGTGTGGGAACAGGACACCACGTTCCTCGCCCTGCTGCGGGCGGCGATGAC
CAGTGAATCCGCCGCCGACACGCTGCGGCACGTCTTCGCCACCCAGGTGGCGCCCGCACTCGCCGCCGTCGCGCCCGACC
ATCCGGCGCAGCGCGCCGGCCTGATGGGGGCGTTCGTGATCGGGTTGGCCACCACCCGCTACGTGCTCGCCAATCCCGCC
GTCGCCGATCTCAGCCGCGAGGACCTCCTGCGTTTCGCGCGCCCCATGATCCACCAACTCCTGCTGGGTCCGCTCCCCGA
CTGA

Upstream 100 bases:

>100_bases
GCTGTACGCCCGATCTACGGCCCGCAGGACAGCGCCTGCGGCATAGGGGACCGTCGGCGTTCGAGGGGTTGCCGACAGAC
TGCCCCCTATTGTTCTTCGA

Downstream 100 bases:

>100_bases
TCTTTTCCCCGCCTTTTTGAACGACGTGGCGCCGCGACACGTCTTGAGTAGGTAGAGGGAGAGTGCCATGAGTGTTGTCG
CAGCCGTACGCGGCGAGGTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR-Family Protein Transcriptional Regulator; Regulatory Protein

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MGTERTRNAPQTRADILAAARRRFGADGYQRTTLRGVAADVGVDAALIIRYFGSKQELFAEAAEFRIDLPDLGTVEPDRI
ADVLLSRFFAVWEQDTTFLALLRAAMTSESAADTLRHVFATQVAPALAAVAPDHPAQRAGLMGAFVIGLATTRYVLANPA
VADLSREDLLRFARPMIHQLLLGPLPD

Sequences:

>Translated_187_residues
MGTERTRNAPQTRADILAAARRRFGADGYQRTTLRGVAADVGVDAALIIRYFGSKQELFAEAAEFRIDLPDLGTVEPDRI
ADVLLSRFFAVWEQDTTFLALLRAAMTSESAADTLRHVFATQVAPALAAVAPDHPAQRAGLMGAFVIGLATTRYVLANPA
VADLSREDLLRFARPMIHQLLLGPLPD
>Mature_186_residues
GTERTRNAPQTRADILAAARRRFGADGYQRTTLRGVAADVGVDAALIIRYFGSKQELFAEAAEFRIDLPDLGTVEPDRIA
DVLLSRFFAVWEQDTTFLALLRAAMTSESAADTLRHVFATQVAPALAAVAPDHPAQRAGLMGAFVIGLATTRYVLANPAV
ADLSREDLLRFARPMIHQLLLGPLPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20317; Mature: 20185

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTERTRNAPQTRADILAAARRRFGADGYQRTTLRGVAADVGVDAALIIRYFGSKQELFA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHH
EAAEFRIDLPDLGTVEPDRIADVLLSRFFAVWEQDTTFLALLRAAMTSESAADTLRHVFA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHH
TQVAPALAAVAPDHPAQRAGLMGAFVIGLATTRYVLANPAVADLSREDLLRFARPMIHQL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH
LLGPLPD
HHCCCCC
>Mature Secondary Structure 
GTERTRNAPQTRADILAAARRRFGADGYQRTTLRGVAADVGVDAALIIRYFGSKQELFA
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHH
EAAEFRIDLPDLGTVEPDRIADVLLSRFFAVWEQDTTFLALLRAAMTSESAADTLRHVFA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHH
TQVAPALAAVAPDHPAQRAGLMGAFVIGLATTRYVLANPAVADLSREDLLRFARPMIHQL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH
LLGPLPD
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA