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The map label for this gene is ccsA [H]

Identifier: 108797675

GI number: 108797675

Start: 748662

End: 749666

Strand: Direct

Name: ccsA [H]

Synonym: Mmcs_0695

Alternate gene names: 108797675

Gene position: 748662-749666 (Clockwise)

Preceding gene: 108797674

Following gene: 108797676

Centisome position: 13.12

GC content: 69.75

Gene sequence:

>1005_bases
ATGAATACCGTCGAGATCGACCTCGGTCTGGCCCGGTACTCCGACTGGGCGTTCACGTCATCGGTCGTGGTGCTCGTGGT
GGCGCTGCTGCTGCTTGCCGTCGAACTGGCCTACAGCCGCGGCCGCACGGTGGAACGCCGCGAGCTGGTCTCCGCCGGAG
CCGCCCCGGCGGCGACATCGGGTCGAGGCGTCGGCGCCGACAGCGCAGGCCCGGGCATCGTCGCCGACACCCCCAGGCGT
CCGCTCGGCGAGCGGATCGGCTCGTCGGGGGTGGCGCTGGTCTACGTCGGCACCGCGCTGCTGCTGGCGTGCATCGTGCT
GCGCGGGCTGTCCACCTCACGGGTGCCGTGGGGCAACATGTACGAGTTCATCAACCTGACCTCGTTCTGCGGTCTGGTCG
CCGCCGCGGTGGTGTTGCGCCGGCCGCAGTACCGCGCGCTGTGGGTGTTCGTCCTGGTCCCGGTGCTCATCCTGCTCACG
GTGTCGGGCCGGTGGCTCTACTCACACGCCGCCCCCGTCATGCCGGCGTTGCAGTCGTACTGGCTGCCCATCCACGTGTC
GGTGGTCAGCCTCGGCTCCGGGGTGTTCCTCGTCGGCGGTGTCGCCAGCATCCTGTTCCTGCTCAAGATGTCGCGGTTCG
GTCAGCCCGGGCACGACGGCCCGGTGGCGCGGATCGTGCAGCGGCTGCCCGACGCGCAGACCCTCGACCGCATCGCCTAC
CGCACGACGATCTTCGCGTTCCCGGTGTTCGGGTTCGGCGTGATCTTCGGCGCAATCTGGGCCGAGGAGGCGTGGGGCCG
CTACTGGGGCTGGGACCCCAAGGAGACGGTGTCGTTCATCGCGTGGGTGGTCTACGCCGCCTACCTGCACGCCCGCTCGA
CGGCCGGGTGGCGGGACCGCAAGGCCGCGTGGATCAACGTGGCCGGGTTCATCGCGATGGTGTTCAACCTGTTCTTCATC
AACCTCGTCACCGTCGGCCTGCACTCCTACGCCGGGGTCGGCTGA

Upstream 100 bases:

>100_bases
GGCCGACGCCGTGTCAGGAGAGAGAGTCACATGAACGCTCAGCGAGTAGCGAAGGCGGATCGCGCATGAACGCTCAGCGA
GTAGCGAAGGCGGATCGCGC

Downstream 100 bases:

>100_bases
TGGGTGACCACTCGGCGGGCGGGTTCCGGGCTCAGCAGCGGTTCCGCGATCCGGCGGCCGACGAGCCGCAGGCGCCGCCG
GAGTGGTCTGTCCCCACCCC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNTVEIDLGLARYSDWAFTSSVVVLVVALLLLAVELAYSRGRTVERRELVSAGAAPAATSGRGVGADSAGPGIVADTPRR
PLGERIGSSGVALVYVGTALLLACIVLRGLSTSRVPWGNMYEFINLTSFCGLVAAAVVLRRPQYRALWVFVLVPVLILLT
VSGRWLYSHAAPVMPALQSYWLPIHVSVVSLGSGVFLVGGVASILFLLKMSRFGQPGHDGPVARIVQRLPDAQTLDRIAY
RTTIFAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFIAWVVYAAYLHARSTAGWRDRKAAWINVAGFIAMVFNLFFI
NLVTVGLHSYAGVG

Sequences:

>Translated_334_residues
MNTVEIDLGLARYSDWAFTSSVVVLVVALLLLAVELAYSRGRTVERRELVSAGAAPAATSGRGVGADSAGPGIVADTPRR
PLGERIGSSGVALVYVGTALLLACIVLRGLSTSRVPWGNMYEFINLTSFCGLVAAAVVLRRPQYRALWVFVLVPVLILLT
VSGRWLYSHAAPVMPALQSYWLPIHVSVVSLGSGVFLVGGVASILFLLKMSRFGQPGHDGPVARIVQRLPDAQTLDRIAY
RTTIFAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFIAWVVYAAYLHARSTAGWRDRKAAWINVAGFIAMVFNLFFI
NLVTVGLHSYAGVG
>Mature_334_residues
MNTVEIDLGLARYSDWAFTSSVVVLVVALLLLAVELAYSRGRTVERRELVSAGAAPAATSGRGVGADSAGPGIVADTPRR
PLGERIGSSGVALVYVGTALLLACIVLRGLSTSRVPWGNMYEFINLTSFCGLVAAAVVLRRPQYRALWVFVLVPVLILLT
VSGRWLYSHAAPVMPALQSYWLPIHVSVVSLGSGVFLVGGVASILFLLKMSRFGQPGHDGPVARIVQRLPDAQTLDRIAY
RTTIFAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFIAWVVYAAYLHARSTAGWRDRKAAWINVAGFIAMVFNLFFI
NLVTVGLHSYAGVG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 36177; Mature: 36177

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVEIDLGLARYSDWAFTSSVVVLVVALLLLAVELAYSRGRTVERRELVSAGAAPAATS
CCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
GRGVGADSAGPGIVADTPRRPLGERIGSSGVALVYVGTALLLACIVLRGLSTSRVPWGNM
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHH
YEFINLTSFCGLVAAAVVLRRPQYRALWVFVLVPVLILLTVSGRWLYSHAAPVMPALQSY
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHC
WLPIHVSVVSLGSGVFLVGGVASILFLLKMSRFGQPGHDGPVARIVQRLPDAQTLDRIAY
CHHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHH
RTTIFAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFIAWVVYAAYLHARSTAGWRDR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KAAWINVAGFIAMVFNLFFINLVTVGLHSYAGVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTVEIDLGLARYSDWAFTSSVVVLVVALLLLAVELAYSRGRTVERRELVSAGAAPAATS
CCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
GRGVGADSAGPGIVADTPRRPLGERIGSSGVALVYVGTALLLACIVLRGLSTSRVPWGNM
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHH
YEFINLTSFCGLVAAAVVLRRPQYRALWVFVLVPVLILLTVSGRWLYSHAAPVMPALQSY
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHC
WLPIHVSVVSLGSGVFLVGGVASILFLLKMSRFGQPGHDGPVARIVQRLPDAQTLDRIAY
CHHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHH
RTTIFAFPVFGFGVIFGAIWAEEAWGRYWGWDPKETVSFIAWVVYAAYLHARSTAGWRDR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KAAWINVAGFIAMVFNLFFINLVTVGLHSYAGVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA