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The map label for this gene is 108797622

Identifier: 108797622

GI number: 108797622

Start: 706087

End: 706572

Strand: Direct

Name: 108797622

Synonym: Mmcs_0642

Alternate gene names: NA

Gene position: 706087-706572 (Clockwise)

Preceding gene: 108797621

Following gene: 108797623

Centisome position: 12.38

GC content: 63.37

Gene sequence:

>486_bases
ATGTCGCAGGACGAGAATCTTGCCGCCGTGGTGACCAACGCCGCTCAGGACATCGGCAGCTTCATCCGGAGCCAGCGAGA
AGCGGCGCAGGTGTCCGTGCGGCAGCTGGCGGAGAAGGCCGGTGTCAGCAATCCCTATCTCAGCCAGATCGAGCGGGGAC
TGCGGAAACCGTCCGCCGATGTGCTCAACCAGATCGCCAAGGCGTTGCGGGTCTCGGCCGAAGTGCTCTACGTGCGAGCC
GGGATCCTCGAACCCAGCGAGGCCGGACAGGTCCGCGACGCCATCCTCAGCGACACGGCGATCACCGAGCGGCAGAAGCA
GGTGCTGCTCGACATCTACACGTCGTTCTGCCAGCAGAACGAGGTAGCCGGAAGCGAAGTAGACGAGGAGCCGACGACTG
CACACACACCGATCAGTGGCGACCCGATCCAACGCGCACTAGAAACCACACCCGAAGATTCCCGAAAGGACATCCACCAT
GGCTGA

Upstream 100 bases:

>100_bases
TCTGACCTGCGCTAGCTAGTGCTTGCAAAAGTTAGCACCCCCGCGTACGGTTGGTGATGTCGTTGATCGGATACCCGCGT
TTCGAGGGGGTTGTCACCCA

Downstream 100 bases:

>100_bases
GAAGAACCCCCAGGTCGACATCGAAGACCTCAAGGCCCCGCTGCTCGCCGCCGTCGGCGCCGCCGATCTGGCGCTGGCCA
CCGTCAACGAGATCGTCGCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSQDENLAAVVTNAAQDIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYVRA
GILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQNEVAGSEVDEEPTTAHTPISGDPIQRALETTPEDSRKDIHH
G

Sequences:

>Translated_161_residues
MSQDENLAAVVTNAAQDIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYVRA
GILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQNEVAGSEVDEEPTTAHTPISGDPIQRALETTPEDSRKDIHH
G
>Mature_160_residues
SQDENLAAVVTNAAQDIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYVRAG
ILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQNEVAGSEVDEEPTTAHTPISGDPIQRALETTPEDSRKDIHHG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 17509; Mature: 17377

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDENLAAVVTNAAQDIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHH
VLNQIAKALRVSAEVLYVRAGILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQN
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EVAGSEVDEEPTTAHTPISGDPIQRALETTPEDSRKDIHHG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCC
>Mature Secondary Structure 
SQDENLAAVVTNAAQDIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHH
VLNQIAKALRVSAEVLYVRAGILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQN
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EVAGSEVDEEPTTAHTPISGDPIQRALETTPEDSRKDIHHG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]