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The map label for this gene is dhaR [C]

Identifier: 108797606

GI number: 108797606

Start: 690698

End: 692014

Strand: Direct

Name: dhaR [C]

Synonym: Mmcs_0626

Alternate gene names: 108797606

Gene position: 690698-692014 (Clockwise)

Preceding gene: 108797605

Following gene: 108797607

Centisome position: 12.11

GC content: 71.83

Gene sequence:

>1317_bases
GTGATGCCTCGCCCGCCCGTCCCGGAACCCGCTGTCGCAGCGGGCGAGGACCCACGTCAGTACGCCCGGCTGATGTCGGC
GGTCTACGACGCCACCATGGCGGGTGGCCGAGCCCCCGCGCGTCCCCGCAAGGTCATCGAGGACTCGTGGCGCCGGCTCA
TGGCCCGCGGCATCGAACCCGACACGCTGCCCGACCCCGAGGTGGAGGGCGCCACGCTGGAGGAGATGCGCCACGCCTCC
GGGTTGATGTCGGTGCTCGAGGACCTCTCGCGCGGGCTGGAATCGCTGATCGTCGAGGGCGACAACATCCTCGTGGTCGC
CGATGCGCGGGGCCGGGTGCTGTGGCGGGCGGGGTCGCGTGCGGTGCTCGGGTCCGCGGACCGGCTGGGCTTCATCGAGG
GGGCACACTGGGGCGAGAACGCCGTCGGCACCAACGCCATCGGCACCGCGCTGATGTCGAATGCCGCGGTGCAGGTGTTC
TCCGCCGAGCACTTCTCGCGCAGTCACCACCCGTGGACCTGCGCGGGCGCGCCCATCAAGGATCCCAGGACCGGTCACGT
CATCGGCGTGGTGGACGTGTCCGGGCCCGCGGCCACCGTGCATCCGACGACGGTGGCGCTCGTCGACGCCGTGGCGCGCC
TCGCCGAATCGCATCTGCGCGAACAACACAACCGCACGCTGAACAGCCTGCGGATGGTCGCGGCGCCCATCCTGGCCCGC
ATCGGCAGCCCCGCCCTCGCGGTCGACCCCGACGGCTGGGTCGCCGCGGTGGATTCGCTTCCGCCGCACAACCGGATCGC
GCTGCCCCGCGAGGTGACACCCGGCCGGCTGCTGGTCCCGGCGCTGGGGCTGTGCGACGTCGATCCGCTGCCCGGCGGAT
GGCTGGTCCGGTTGGCCGGCGACCGGGAGGCCGACTCCGGGTCGCAGGTGGCGCTCGATCTCCGTAACCCGGAGGCGCCG
GTATTGAAGATGGTCGGACAGGCCGGCGGCTGGCGCCGCGACCTGAGCCTCCGGCACGCGGAAATCCTTCTCGCGCTTGC
GGTTCAGCGACAGGGCCGGTCGGCGCCGGAGCTGGCGGCCGATCTGTACGGCGATGCGTCGCGGGTGGTGACGGTGCGCG
CCGAGGTCTCGCGGATGCGCAAACAGTTCATCGGACTGCTCGCCGCGCAGCCGTACCGCATCACCGACACCGTGCATCTC
GACGTGCAGTACCCCGCCGATAGGATGCGACTCCTGCCGACGTCGACCGCTCCCGTCGTCCGCGCCGCACGCATCGGACC
ACCGAATTCCCAACCCCACCAAGGAGGAAACGCATGA

Upstream 100 bases:

>100_bases
GGCGCCGACTACATGACCGGACAGGCCGGTCTCATCGACGGCGGCATGGTCTACCGGTGACCTCGTTGCCGCGCCGTTGT
GACGGGGAGCACAATCGGCA

Downstream 100 bases:

>100_bases
CTGTCTACGCACGCCCCGGTGCCGCGGATGCATTGATGGCTTTCGAGTCGCGGTACGGCAACTTCATCGGCGGCGAGTGG
GTCGCGCCCGCGGGCGGGGA

Product: putative GAF sensor protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MMPRPPVPEPAVAAGEDPRQYARLMSAVYDATMAGGRAPARPRKVIEDSWRRLMARGIEPDTLPDPEVEGATLEEMRHAS
GLMSVLEDLSRGLESLIVEGDNILVVADARGRVLWRAGSRAVLGSADRLGFIEGAHWGENAVGTNAIGTALMSNAAVQVF
SAEHFSRSHHPWTCAGAPIKDPRTGHVIGVVDVSGPAATVHPTTVALVDAVARLAESHLREQHNRTLNSLRMVAAPILAR
IGSPALAVDPDGWVAAVDSLPPHNRIALPREVTPGRLLVPALGLCDVDPLPGGWLVRLAGDREADSGSQVALDLRNPEAP
VLKMVGQAGGWRRDLSLRHAEILLALAVQRQGRSAPELAADLYGDASRVVTVRAEVSRMRKQFIGLLAAQPYRITDTVHL
DVQYPADRMRLLPTSTAPVVRAARIGPPNSQPHQGGNA

Sequences:

>Translated_438_residues
MMPRPPVPEPAVAAGEDPRQYARLMSAVYDATMAGGRAPARPRKVIEDSWRRLMARGIEPDTLPDPEVEGATLEEMRHAS
GLMSVLEDLSRGLESLIVEGDNILVVADARGRVLWRAGSRAVLGSADRLGFIEGAHWGENAVGTNAIGTALMSNAAVQVF
SAEHFSRSHHPWTCAGAPIKDPRTGHVIGVVDVSGPAATVHPTTVALVDAVARLAESHLREQHNRTLNSLRMVAAPILAR
IGSPALAVDPDGWVAAVDSLPPHNRIALPREVTPGRLLVPALGLCDVDPLPGGWLVRLAGDREADSGSQVALDLRNPEAP
VLKMVGQAGGWRRDLSLRHAEILLALAVQRQGRSAPELAADLYGDASRVVTVRAEVSRMRKQFIGLLAAQPYRITDTVHL
DVQYPADRMRLLPTSTAPVVRAARIGPPNSQPHQGGNA
>Mature_438_residues
MMPRPPVPEPAVAAGEDPRQYARLMSAVYDATMAGGRAPARPRKVIEDSWRRLMARGIEPDTLPDPEVEGATLEEMRHAS
GLMSVLEDLSRGLESLIVEGDNILVVADARGRVLWRAGSRAVLGSADRLGFIEGAHWGENAVGTNAIGTALMSNAAVQVF
SAEHFSRSHHPWTCAGAPIKDPRTGHVIGVVDVSGPAATVHPTTVALVDAVARLAESHLREQHNRTLNSLRMVAAPILAR
IGSPALAVDPDGWVAAVDSLPPHNRIALPREVTPGRLLVPALGLCDVDPLPGGWLVRLAGDREADSGSQVALDLRNPEAP
VLKMVGQAGGWRRDLSLRHAEILLALAVQRQGRSAPELAADLYGDASRVVTVRAEVSRMRKQFIGLLAAQPYRITDTVHL
DVQYPADRMRLLPTSTAPVVRAARIGPPNSQPHQGGNA

Specific function: Required For Sigma-54-Dependent Transcription Of The Glycerol Utilization Dha Operon (Probable). [C]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46822; Mature: 46822

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPRPPVPEPAVAAGEDPRQYARLMSAVYDATMAGGRAPARPRKVIEDSWRRLMARGIEP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
DTLPDPEVEGATLEEMRHASGLMSVLEDLSRGLESLIVEGDNILVVADARGRVLWRAGSR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCEEEEECCCC
AVLGSADRLGFIEGAHWGENAVGTNAIGTALMSNAAVQVFSAEHFSRSHHPWTCAGAPIK
EEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCHHHEEEEHHHHCCCCCCEEECCCCCC
DPRTGHVIGVVDVSGPAATVHPTTVALVDAVARLAESHLREQHNRTLNSLRMVAAPILAR
CCCCCCEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSPALAVDPDGWVAAVDSLPPHNRIALPREVTPGRLLVPALGLCDVDPLPGGWLVRLAG
CCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEC
DREADSGSQVALDLRNPEAPVLKMVGQAGGWRRDLSLRHAEILLALAVQRQGRSAPELAA
CCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
DLYGDASRVVTVRAEVSRMRKQFIGLLAAQPYRITDTVHLDVQYPADRMRLLPTSTAPVV
HHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHEEECCCCCCHHH
RAARIGPPNSQPHQGGNA
HHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMPRPPVPEPAVAAGEDPRQYARLMSAVYDATMAGGRAPARPRKVIEDSWRRLMARGIEP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
DTLPDPEVEGATLEEMRHASGLMSVLEDLSRGLESLIVEGDNILVVADARGRVLWRAGSR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCEEEEECCCC
AVLGSADRLGFIEGAHWGENAVGTNAIGTALMSNAAVQVFSAEHFSRSHHPWTCAGAPIK
EEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCHHHEEEEHHHHCCCCCCEEECCCCCC
DPRTGHVIGVVDVSGPAATVHPTTVALVDAVARLAESHLREQHNRTLNSLRMVAAPILAR
CCCCCCEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSPALAVDPDGWVAAVDSLPPHNRIALPREVTPGRLLVPALGLCDVDPLPGGWLVRLAG
CCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEC
DREADSGSQVALDLRNPEAPVLKMVGQAGGWRRDLSLRHAEILLALAVQRQGRSAPELAA
CCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
DLYGDASRVVTVRAEVSRMRKQFIGLLAAQPYRITDTVHLDVQYPADRMRLLPTSTAPVV
HHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHEEECCCCCCHHH
RAARIGPPNSQPHQGGNA
HHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]