| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is acrR [C]
Identifier: 108797600
GI number: 108797600
Start: 682303
End: 682884
Strand: Direct
Name: acrR [C]
Synonym: Mmcs_0620
Alternate gene names: 108797600
Gene position: 682303-682884 (Clockwise)
Preceding gene: 108797596
Following gene: 108797605
Centisome position: 11.96
GC content: 70.96
Gene sequence:
>582_bases GTGAGCAGCCAGACAATCGCCCACGGGGGACCGACCCGGCAGCGTCTCATCGACGTGGCGATCGAGCTGTTCAAACAACA CAGCGTGGCCGGTACGTCACTGCAGATGATCTCCGACGAACTCGGCCTGACGAAGTCGGCCATCTACCACCACTTCCGCA CCCGCGACGAACTCCTGAGCGCGGTGATGGAACCGCTCATCGCCGAGGTGACCGCCCTCGTCGAGGCAGCCGAGGCCCGC ACCGGAGTCCGCGCCCGCGCCGACCACCTGCTCTGCGGTTACGCCGCGCTGGCCGCGGCCCACCGCGACCTGATCCCGTT GCTCACCGGCGACCCCGGCGTCGTCGCCCTGCTGCGGATCCGCGCGGACTGGGGTGCGGTCGTGGAGCGTCAGATGGCCG TGTTCGCCGCCGTCGAACCCGGCCTGGGCGGTCAGGTGAAAGCCGCGGTCGTCATGTCCGGGATCGCCTCGGCGGCAGGC GCCGACTACGGTGACGCCGACGATGCGGAGCTGCGCGATCAGCTGATCGCGGCCGGCCGCCGCGCGCTCGGATTGCGGGC ACCGCACGGCCGCTCTCGCTAG
Upstream 100 bases:
>100_bases GGCGTGGTCGGCGGCGCGAATCTACTGACCAACCGTACAGGTCTCTCCTGACCAAACGTACAGCAGATTCCTGTACGAAT GGTCAGGTAGAGTCTGGAGT
Downstream 100 bases:
>100_bases CCGTTCGTCAGAACGGTGGTGGTCGCTCCGCGCGCGAATTTCGTTGGGCGGCGTTGTGTTCGCGTTCGGCTTTGACGCGG GCGGCGTTGTCGGCGGCGCG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family Protein; Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator; Gamma-Butyrolactone Autoregulator Receptor
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSSQTIAHGGPTRQRLIDVAIELFKQHSVAGTSLQMISDELGLTKSAIYHHFRTRDELLSAVMEPLIAEVTALVEAAEAR TGVRARADHLLCGYAALAAAHRDLIPLLTGDPGVVALLRIRADWGAVVERQMAVFAAVEPGLGGQVKAAVVMSGIASAAG ADYGDADDAELRDQLIAAGRRALGLRAPHGRSR
Sequences:
>Translated_193_residues MSSQTIAHGGPTRQRLIDVAIELFKQHSVAGTSLQMISDELGLTKSAIYHHFRTRDELLSAVMEPLIAEVTALVEAAEAR TGVRARADHLLCGYAALAAAHRDLIPLLTGDPGVVALLRIRADWGAVVERQMAVFAAVEPGLGGQVKAAVVMSGIASAAG ADYGDADDAELRDQLIAAGRRALGLRAPHGRSR >Mature_192_residues SSQTIAHGGPTRQRLIDVAIELFKQHSVAGTSLQMISDELGLTKSAIYHHFRTRDELLSAVMEPLIAEVTALVEAAEART GVRARADHLLCGYAALAAAHRDLIPLLTGDPGVVALLRIRADWGAVVERQMAVFAAVEPGLGGQVKAAVVMSGIASAAGA DYGDADDAELRDQLIAAGRRALGLRAPHGRSR
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20349; Mature: 20217
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQTIAHGGPTRQRLIDVAIELFKQHSVAGTSLQMISDELGLTKSAIYHHFRTRDELLS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHH AVMEPLIAEVTALVEAAEARTGVRARADHLLCGYAALAAAHRDLIPLLTGDPGVVALLRI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEHEEE RADWGAVVERQMAVFAAVEPGLGGQVKAAVVMSGIASAAGADYGDADDAELRDQLIAAGR CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH RALGLRAPHGRSR HHHCCCCCCCCCC >Mature Secondary Structure SSQTIAHGGPTRQRLIDVAIELFKQHSVAGTSLQMISDELGLTKSAIYHHFRTRDELLS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHH AVMEPLIAEVTALVEAAEARTGVRARADHLLCGYAALAAAHRDLIPLLTGDPGVVALLRI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEHEEE RADWGAVVERQMAVFAAVEPGLGGQVKAAVVMSGIASAAGADYGDADDAELRDQLIAAGR CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH RALGLRAPHGRSR HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA