Click here to switch to the map view.

The map label for this gene is 108797578

Identifier: 108797578

GI number: 108797578

Start: 657686

End: 659110

Strand: Direct

Name: 108797578

Synonym: Mmcs_0598

Alternate gene names: NA

Gene position: 657686-659110 (Clockwise)

Preceding gene: 108797577

Following gene: 108797579

Centisome position: 11.53

GC content: 73.12

Gene sequence:

>1425_bases
TTGAGCCCCCGCATGCTGCTGGTCCATCCGGTGCACGAGGTGCTGCGGCAGGTTCCGGTGCTGATCGGGTCGGTGGTGCT
CGGCTCCGCGACCGGCAATCCGTGGTGGGCGGTCGCCGCCCTGGTGGGGACGGTCGGCGTCGGGATCGCGCGGTGGTTCA
CCACGACCTACCGGATCGACGCCGAGGAGGTGCAGCTTCGCGCAGGTGTCCTGCAACGCCGGGTCCTGTCGGTGCCGCGC
AACAGGATTCGGTCGGTCTCCACCGATGCCCGCCTGCTGCACCGGGTACTCGGCCTGGCCGTGCTGCGCGTGAGCACCGG
ACAGGAGGCGCGCGGTGACGACGCGTTCGCGCTCGACGCCGTCGAGGCCGCCCAGGTCCCGCATCTGCGGGCCGAACTGC
TGGCCGAGTCGCTGACCATCGCCGCCGATCCCGAACACCGGGGACGGGTGCTGGCCCGCTGGCAGCCGGCGTGGCTGCGG
TACAGCCCGCTCAGCTTCACCGGTCTGGCGATGATCGCCGCCGCGGCGGGTCTGCTGTACCAGGCGGGAGCCGGTGTGCT
GCTGCGGGATTCGAGCCTGGCCGAGGGCGGACGCGGCGTCGCCGAGCGGTTCGGCGTTGCGGCGACCGTGGCCGTCGTCG
TACTGGCCGTGCTGGTCGGGTCCGTGGTGCTGTCGGTGCTCCGGTCCCTGGTGACGTACGGAAACCTGTTGTTGTGGCGC
GACGGTGAGGTGCTGCATCTCGAACACGGTCTGCTGCGTCGACAGGAACACACCTACGACATGCGCCGGCTCCGCGGCGG
CACGTTGCGGGAGCCGCTGTTGGTCAGGGCGTTCGGTGGTGCGCGGCTGGACGCGGTGATGACCGGGGTGGGCGGTGAGG
GCGAGGCGTCGTTGTTGTTGCCGCCCTGCCCGGCCGCGACGGCCCGGGCGGTGCTCAGTGATCTCATCGCCGATGAGGAG
GAGGTCGCCGGACCGCTGCGCAGCCACGGGGTGGCCGCGGCGCGGCGGCGGTGGACCAGGGCGCTCGCCGTGCCGGTGGC
AATGGGGGTCGCGCTGGTGGTGGCGACCGTCTTCACGGCGCCGCCGATCTGGCTGTGGGCGGTGTGGGCGGTTCTCGCGG
TGTGCTGCGCGCTGCTGGCCGCCGACCGGGTCCGCTCGCTCGGGCACCGGGCCGGCCACGGCTGGCTGGTGGCGCGCACC
GGCAGCCTCGAGCGCCGCCGCGACTGCATCGCCGGTCCGGGCATCATCGGCTGGACGGTGCAACAGACGTTCTTCCAGCG
GCGGTCCGGGGTGGCGACGCTGATCGCCGCCACCGCCGCGGGGGAGAAGGCCTACCGGGTCGTCGACGTCCCCGCCGATG
CGGCGTGGTCGATCGTCGCGGCGGCGTCGCCGTGGGTGAGGGATGTCCCCTGGGCGCGTGATTGA

Upstream 100 bases:

>100_bases
CGGTGGCCGAACGGATCGTCGCGCAGCTGACCGACATCGCGGCGCTCGGCGAACAGGATGCGACGTGACGGCCCCGGCGC
CACAACCGCAATGGCTGCGG

Downstream 100 bases:

>100_bases
CCGGGTCCGAGTTGCACGTCGTCGGCCGCGGTTTACTGTCGGCACATGGCGATCGGTGGAGTGCTCTTCGACATCGATGG
CGTGCTGGTGACGTCGTGGC

Product: membrane-flanked domain-containing protein

Products: NA

Alternate protein names: Membrane-Flanked Domain Protein; Membrane Flanked Domain-Containing Protein; Transmembrane Protein; Membrane-Flanked Domain; Integral Membrane Protein

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTTYRIDAEEVQLRAGVLQRRVLSVPR
NRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAFALDAVEAAQVPHLRAELLAESLTIAADPEHRGRVLARWQPAWLR
YSPLSFTGLAMIAAAAGLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLRSLVTYGNLLLWR
DGEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGGEGEASLLLPPCPAATARAVLSDLIADEE
EVAGPLRSHGVAAARRRWTRALAVPVAMGVALVVATVFTAPPIWLWAVWAVLAVCCALLAADRVRSLGHRAGHGWLVART
GSLERRRDCIAGPGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRDVPWARD

Sequences:

>Translated_474_residues
MSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTTYRIDAEEVQLRAGVLQRRVLSVPR
NRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAFALDAVEAAQVPHLRAELLAESLTIAADPEHRGRVLARWQPAWLR
YSPLSFTGLAMIAAAAGLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLRSLVTYGNLLLWR
DGEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGGEGEASLLLPPCPAATARAVLSDLIADEE
EVAGPLRSHGVAAARRRWTRALAVPVAMGVALVVATVFTAPPIWLWAVWAVLAVCCALLAADRVRSLGHRAGHGWLVART
GSLERRRDCIAGPGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRDVPWARD
>Mature_473_residues
SPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTTYRIDAEEVQLRAGVLQRRVLSVPRN
RIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAFALDAVEAAQVPHLRAELLAESLTIAADPEHRGRVLARWQPAWLRY
SPLSFTGLAMIAAAAGLLYQAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLRSLVTYGNLLLWRD
GEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGGEGEASLLLPPCPAATARAVLSDLIADEEE
VAGPLRSHGVAAARRRWTRALAVPVAMGVALVVATVFTAPPIWLWAVWAVLAVCCALLAADRVRSLGHRAGHGWLVARTG
SLERRRDCIAGPGIIGWTVQQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRDVPWARD

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50722; Mature: 50590

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTTYRID
CCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEC
AEEVQLRAGVLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAFALDA
HHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH
VEAAQVPHLRAELLAESLTIAADPEHRGRVLARWQPAWLRYSPLSFTGLAMIAAAAGLLY
HHHHHCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHH
QAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLRSLVTYGNLLLWR
HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
DGEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGGEGEASLLL
CCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCEEEE
PPCPAATARAVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAMGVALVVATVFTA
CCCCHHHHHHHHHHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPIWLWAVWAVLAVCCALLAADRVRSLGHRAGHGWLVARTGSLERRRDCIAGPGIIGWTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHH
QQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRDVPWARD
HHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure 
SPRMLLVHPVHEVLRQVPVLIGSVVLGSATGNPWWAVAALVGTVGVGIARWFTTTYRID
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEC
AEEVQLRAGVLQRRVLSVPRNRIRSVSTDARLLHRVLGLAVLRVSTGQEARGDDAFALDA
HHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH
VEAAQVPHLRAELLAESLTIAADPEHRGRVLARWQPAWLRYSPLSFTGLAMIAAAAGLLY
HHHHHCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHH
QAGAGVLLRDSSLAEGGRGVAERFGVAATVAVVVLAVLVGSVVLSVLRSLVTYGNLLLWR
HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
DGEVLHLEHGLLRRQEHTYDMRRLRGGTLREPLLVRAFGGARLDAVMTGVGGEGEASLLL
CCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCEEEE
PPCPAATARAVLSDLIADEEEVAGPLRSHGVAAARRRWTRALAVPVAMGVALVVATVFTA
CCCCHHHHHHHHHHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPIWLWAVWAVLAVCCALLAADRVRSLGHRAGHGWLVARTGSLERRRDCIAGPGIIGWTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHH
QQTFFQRRSGVATLIAATAAGEKAYRVVDVPADAAWSIVAAASPWVRDVPWARD
HHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA