| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797535
Identifier: 108797535
GI number: 108797535
Start: 615653
End: 616957
Strand: Direct
Name: 108797535
Synonym: Mmcs_0555
Alternate gene names: NA
Gene position: 615653-616957 (Clockwise)
Preceding gene: 108797534
Following gene: 108797539
Centisome position: 10.79
GC content: 67.89
Gene sequence:
>1305_bases ATGCAGACCGCTGTTCGCTCGTACGTGTCGGCAGGTGTCGCCCTCGCCGGTGTCGGCGCCATCGCCTTCAGCCCAGTGGT GCCGATTCCGGACGTCGAGGTGCCGGCGATCTCGTCGTCGGCCGTCGAGCTCAACGCGCTCGTCAACCCGATCGAGCTCT TCGTGCCGATCTTCGAGAAGGCGTTCGCGGACACCGGCGCGCTCGGTCAGCGGGTCTTCGCGAATCCCGCGCCGATCCTG GAGCAGATCCTGGCCAACCAGGTCGCCAGCGCCCAGACGCTCGGCGAGATCGCCGGGGTGTTCGGGGAGTCCTTCCAGAC GGCATTCGCGGCCGCCCCGGGACTGCTCGAGACCGCATTCGATCAGTTCGCGGCCGGTGAGATCACCCTGGCGCTGAACA CCTTGTTCGACCTCGCGCTCTCGCCGGTCATCGGGCCGCTGCTGGACAGCATCTTCATGGGGGACGGGGTCCTCCAGGAC CTCGTGGGCGTCCTCCAGAAACCGTTGGTCAACGCCCAGAATGTGATCGGCCTACTCGGTGACCCCGACTTCCTGCTGAC CATCGGACTCCTCCCCCTGCAGACGGCGTATGCGCTCAACACCGCCGTCGGCGGAGCGGCCGAAGCGCTCCTCGCCGCCG CCGAAGCCGGAGATCCCGAGGGGTTCGTCAATGCGATCACCACCGGTAGTGCGAATGTCACCGCGGCAGTGCTGGACCTA CTCCTCAACCCGGGCACTCCGCCGTACAACTACGACCAGGGTCTCGTCGCTGCGCTTCTGAGCGCCCGCGACATGATCGC CCAAGCCATCGGCGCGCCCGCACCGAGCCCAGCGCTGTTGGCAACAGTGAGCTCGGAGGTGACCGATCCGGCGCTGACGA CCATCACGTTGGACGTCGCGCCTGCATCGGACGCCATCGAGGCCCCGAAACCCGCTGCCGAAACTGATGTTTCAGCCGTC AGCCTCAGCGCCGATGCGGTCGATGCCACGGAGCCCGCGACGGCGGTGGCCGAGGAGACGGCTGCGGTCGAGGCCGGTGT CGATGAGGTCGTCGCGGAATCCGAGGTCGTCACGCCGAAGAAGTCGGATCCGCTCAACGAGCTTCGCAAGGGCGTCGAAG GCGCCGTCAACGACATCCGCAACGGGTTCAAGCACGCCGCGGCGAGCCTCACCGGCAAGGCGAGCAAGCCCGCGAAGTCG GAAAGTTCCCCGGCGTCCGACAGCGGCTCGGCGTCCGAGAGCGACTCGGGGTCGGACTCGGGCAGCGGTTCGGGGTCCGA CTCGACGTCGGGCGACGCCGAGTAG
Upstream 100 bases:
>100_bases TCCCGGCAACGCAACGCCCTGACATGCAAATTCACACTTGCTTTTAACTTACTCTCGGGTAGGTTTCAGGCTCGGGTGGG GATGAGCAAAGGAGAATTCA
Downstream 100 bases:
>100_bases AGCCGTTCCGTCCGGCCTCACACGGTGGAGGTGGAGGGCTCGGCAGATCTGCTCGTGCGCAGGCCCAGCAGGCGCATCCC GTGGTAGACCAGCAGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MQTAVRSYVSAGVALAGVGAIAFSPVVPIPDVEVPAISSSAVELNALVNPIELFVPIFEKAFADTGALGQRVFANPAPIL EQILANQVASAQTLGEIAGVFGESFQTAFAAAPGLLETAFDQFAAGEITLALNTLFDLALSPVIGPLLDSIFMGDGVLQD LVGVLQKPLVNAQNVIGLLGDPDFLLTIGLLPLQTAYALNTAVGGAAEALLAAAEAGDPEGFVNAITTGSANVTAAVLDL LLNPGTPPYNYDQGLVAALLSARDMIAQAIGAPAPSPALLATVSSEVTDPALTTITLDVAPASDAIEAPKPAAETDVSAV SLSADAVDATEPATAVAEETAAVEAGVDEVVAESEVVTPKKSDPLNELRKGVEGAVNDIRNGFKHAAASLTGKASKPAKS ESSPASDSGSASESDSGSDSGSGSGSDSTSGDAE
Sequences:
>Translated_434_residues MQTAVRSYVSAGVALAGVGAIAFSPVVPIPDVEVPAISSSAVELNALVNPIELFVPIFEKAFADTGALGQRVFANPAPIL EQILANQVASAQTLGEIAGVFGESFQTAFAAAPGLLETAFDQFAAGEITLALNTLFDLALSPVIGPLLDSIFMGDGVLQD LVGVLQKPLVNAQNVIGLLGDPDFLLTIGLLPLQTAYALNTAVGGAAEALLAAAEAGDPEGFVNAITTGSANVTAAVLDL LLNPGTPPYNYDQGLVAALLSARDMIAQAIGAPAPSPALLATVSSEVTDPALTTITLDVAPASDAIEAPKPAAETDVSAV SLSADAVDATEPATAVAEETAAVEAGVDEVVAESEVVTPKKSDPLNELRKGVEGAVNDIRNGFKHAAASLTGKASKPAKS ESSPASDSGSASESDSGSDSGSGSGSDSTSGDAE >Mature_434_residues MQTAVRSYVSAGVALAGVGAIAFSPVVPIPDVEVPAISSSAVELNALVNPIELFVPIFEKAFADTGALGQRVFANPAPIL EQILANQVASAQTLGEIAGVFGESFQTAFAAAPGLLETAFDQFAAGEITLALNTLFDLALSPVIGPLLDSIFMGDGVLQD LVGVLQKPLVNAQNVIGLLGDPDFLLTIGLLPLQTAYALNTAVGGAAEALLAAAEAGDPEGFVNAITTGSANVTAAVLDL LLNPGTPPYNYDQGLVAALLSARDMIAQAIGAPAPSPALLATVSSEVTDPALTTITLDVAPASDAIEAPKPAAETDVSAV SLSADAVDATEPATAVAEETAAVEAGVDEVVAESEVVTPKKSDPLNELRKGVEGAVNDIRNGFKHAAASLTGKASKPAKS ESSPASDSGSASESDSGSDSGSGSGSDSTSGDAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43300; Mature: 43300
Theoretical pI: Translated: 3.64; Mature: 3.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTAVRSYVSAGVALAGVGAIAFSPVVPIPDVEVPAISSSAVELNALVNPIELFVPIFEK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AFADTGALGQRVFANPAPILEQILANQVASAQTLGEIAGVFGESFQTAFAAAPGLLETAF HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DQFAAGEITLALNTLFDLALSPVIGPLLDSIFMGDGVLQDLVGVLQKPLVNAQNVIGLLG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHEECCC DPDFLLTIGLLPLQTAYALNTAVGGAAEALLAAAEAGDPEGFVNAITTGSANVTAAVLDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHH LLNPGTPPYNYDQGLVAALLSARDMIAQAIGAPAPSPALLATVSSEVTDPALTTITLDVA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEEC PASDAIEAPKPAAETDVSAVSLSADAVDATEPATAVAEETAAVEAGVDEVVAESEVVTPK CCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCC KSDPLNELRKGVEGAVNDIRNGFKHAAASLTGKASKPAKSESSPASDSGSASESDSGSDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGSGSDSTSGDAE CCCCCCCCCCCCCC >Mature Secondary Structure MQTAVRSYVSAGVALAGVGAIAFSPVVPIPDVEVPAISSSAVELNALVNPIELFVPIFEK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AFADTGALGQRVFANPAPILEQILANQVASAQTLGEIAGVFGESFQTAFAAAPGLLETAF HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DQFAAGEITLALNTLFDLALSPVIGPLLDSIFMGDGVLQDLVGVLQKPLVNAQNVIGLLG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHEECCC DPDFLLTIGLLPLQTAYALNTAVGGAAEALLAAAEAGDPEGFVNAITTGSANVTAAVLDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHH LLNPGTPPYNYDQGLVAALLSARDMIAQAIGAPAPSPALLATVSSEVTDPALTTITLDVA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEEC PASDAIEAPKPAAETDVSAVSLSADAVDATEPATAVAEETAAVEAGVDEVVAESEVVTPK CCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCC KSDPLNELRKGVEGAVNDIRNGFKHAAASLTGKASKPAKSESSPASDSGSASESDSGSDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGSGSDSTSGDAE CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA