| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is lieA [H]
Identifier: 108797533
GI number: 108797533
Start: 612219
End: 613724
Strand: Direct
Name: lieA [H]
Synonym: Mmcs_0553
Alternate gene names: 108797533
Gene position: 612219-613724 (Clockwise)
Preceding gene: 108797532
Following gene: 108797534
Centisome position: 10.73
GC content: 67.13
Gene sequence:
>1506_bases ATGGTGCGCGAGATGCTGGCGGTGCTGTCGATAGTGGCCGTCACGGCAGGCTTGACCGGTTGCGGCGACGATGAAAAGGG AAACCCGGTGCCGGCGCCGTCCACCCAGGAGACCGCACCCGAAGCCAAGGAGTTCGGCGCTGCACTGAAGGACAAGGTGA CCGTGGACGCGATGATGGGCCACCTCGACGAACTCCAGAAGATCGCGGACGCCCACGGCGGCAACCGGGCGCTCAGCACA CCGGGATACGACGCGAGCGTCGACTATGTGGCCAACACCCTGCGCGACAAGGGTTTCGACGTGCAGACCCCCGACTTCGA AGTACGCCTGCCGTTCGCCGAGAAGCCGCAGCTGACCGTCGGCGGGCGGGCCGTCGAGGCCAAAGCGCTGGAGTACACCA TCGGCACCGCGCCGCAGGGCGTCGAAGGTCCGCTCGTGCCCGCCCGCGTCGAAGACTCACCGGGCTGCACCGCGTCGGAC TACGACGGACTGCCGGTGCAGGGTGCGGTGGTGCTGGTCGACCGCGGGGAATGCCCGTTCGGGGTCAAACAGGCCGTCGC CGCCCAACGCGGCGCGGTGGCGCTGGTGGTGGTCAACAACGTCGACGGGGAGGTGGTGAGCGGGACCCTCGGCGACGACA CCGACGTCAAGATCCCCGCCGTCAGCGTCACCAAGGCGGTCGGCGGCGAGTTACGCGACGCTCCGGGGCAGACCACTCTG CGGCTGGAGGCCGGTGTGCGCACAGATCGCACCCGGAATGTCATCGCCCAGACCAAGACCGGATCAACCTCCGATGTGGT GATGGTGGGGGCGCACCTCGACAGCGTTCCGGAGGGTCCTGGCATCAACGACAACGGATCCGGTGTGGCCGCCATCCTCG AGACGGCCTTGCAGCTGGGTGTCGACCCCGACGTGCGCAACACGGTGCGCTTCGGATTCTGGGGCGCCGAGGAACAGGGT CTGCTCGGATCCATGGATTACGTCCAGTCGCTGAACGAGGAACAGCTCAAGGACATCTCGCTCTACCTCAACTTCGACAT GTTGGGCTCACCGAACCCCGGCTATTTCACCTACGACGGCGATCAGTCCGCACCGCCGAACCCCGAGGCGGGTTCGCCTC GGGTGCCGGAGGGGTCGGCGGGCATCGAACGCACCCTCATGCAGTACCTCGACGATGCGGGCAAACCGGGCGAGGACACC AGCTTCGACGGCCGCTCCGACTACGACGGCTTCACCCTCGCAGGCATCCCGGCCGGTGGTTTGTTCTCCGGCGCCGAAGA GGAGAAGACCCCGGAGCAGGCCGAGCGCTGGGGTGGTGAAGCCGACCGACCCTTCGATCCGAACTATCACAAGAAGGAAG ACGATCTCACCCACATCGACCGCACCGCGATGGAGATCAACGGCGGCGGCGTGGCGTACGCGGTCGGGCTGTACGCCCAG GATCAGCGCGGCCGCAACGGGATTCCGATCCGTGACGACCGCACGCGCCATCCCGTCGAATCCTGA
Upstream 100 bases:
>100_bases CGGGCGCCACTCGAGGCAACGGTCAGCGGACATGACCCGCGACCTCGCGCGAAGCGGCGGTTGAGCCTGGCCCACAGTTG CAGCCGCTAACGTGGATGCA
Downstream 100 bases:
>100_bases TGCACATCAGCCGGGCGGTCACAGCGCTGGTGGCGGCGCTGGTCGCGGCGTGCTCGTCACCCGCCCCGCCGCCGGATGTC ACGGGCGGTGATCTGGCAGG
Product: aminopeptidase Y
Products: NA
Alternate protein names: LIE1 [H]
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MVREMLAVLSIVAVTAGLTGCGDDEKGNPVPAPSTQETAPEAKEFGAALKDKVTVDAMMGHLDELQKIADAHGGNRALST PGYDASVDYVANTLRDKGFDVQTPDFEVRLPFAEKPQLTVGGRAVEAKALEYTIGTAPQGVEGPLVPARVEDSPGCTASD YDGLPVQGAVVLVDRGECPFGVKQAVAAQRGAVALVVVNNVDGEVVSGTLGDDTDVKIPAVSVTKAVGGELRDAPGQTTL RLEAGVRTDRTRNVIAQTKTGSTSDVVMVGAHLDSVPEGPGINDNGSGVAAILETALQLGVDPDVRNTVRFGFWGAEEQG LLGSMDYVQSLNEEQLKDISLYLNFDMLGSPNPGYFTYDGDQSAPPNPEAGSPRVPEGSAGIERTLMQYLDDAGKPGEDT SFDGRSDYDGFTLAGIPAGGLFSGAEEEKTPEQAERWGGEADRPFDPNYHKKEDDLTHIDRTAMEINGGGVAYAVGLYAQ DQRGRNGIPIRDDRTRHPVES
Sequences:
>Translated_501_residues MVREMLAVLSIVAVTAGLTGCGDDEKGNPVPAPSTQETAPEAKEFGAALKDKVTVDAMMGHLDELQKIADAHGGNRALST PGYDASVDYVANTLRDKGFDVQTPDFEVRLPFAEKPQLTVGGRAVEAKALEYTIGTAPQGVEGPLVPARVEDSPGCTASD YDGLPVQGAVVLVDRGECPFGVKQAVAAQRGAVALVVVNNVDGEVVSGTLGDDTDVKIPAVSVTKAVGGELRDAPGQTTL RLEAGVRTDRTRNVIAQTKTGSTSDVVMVGAHLDSVPEGPGINDNGSGVAAILETALQLGVDPDVRNTVRFGFWGAEEQG LLGSMDYVQSLNEEQLKDISLYLNFDMLGSPNPGYFTYDGDQSAPPNPEAGSPRVPEGSAGIERTLMQYLDDAGKPGEDT SFDGRSDYDGFTLAGIPAGGLFSGAEEEKTPEQAERWGGEADRPFDPNYHKKEDDLTHIDRTAMEINGGGVAYAVGLYAQ DQRGRNGIPIRDDRTRHPVES >Mature_501_residues MVREMLAVLSIVAVTAGLTGCGDDEKGNPVPAPSTQETAPEAKEFGAALKDKVTVDAMMGHLDELQKIADAHGGNRALST PGYDASVDYVANTLRDKGFDVQTPDFEVRLPFAEKPQLTVGGRAVEAKALEYTIGTAPQGVEGPLVPARVEDSPGCTASD YDGLPVQGAVVLVDRGECPFGVKQAVAAQRGAVALVVVNNVDGEVVSGTLGDDTDVKIPAVSVTKAVGGELRDAPGQTTL RLEAGVRTDRTRNVIAQTKTGSTSDVVMVGAHLDSVPEGPGINDNGSGVAAILETALQLGVDPDVRNTVRFGFWGAEEQG LLGSMDYVQSLNEEQLKDISLYLNFDMLGSPNPGYFTYDGDQSAPPNPEAGSPRVPEGSAGIERTLMQYLDDAGKPGEDT SFDGRSDYDGFTLAGIPAGGLFSGAEEEKTPEQAERWGGEADRPFDPNYHKKEDDLTHIDRTAMEINGGGVAYAVGLYAQ DQRGRNGIPIRDDRTRHPVES
Specific function: A leucine-specific metalloprotease that plays a role in controlling the amount of leupeptin during colony development. Degrades leupeptin into three components, acetyl-leucine, leucine and argininal [H]
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28A subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319763, Length=474, Percent_Identity=31.0126582278481, Blast_Score=195, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008979 - InterPro: IPR007484 - InterPro: IPR002884 [H]
Pfam domain/function: PF01483 P_proprotein; PF04389 Peptidase_M28 [H]
EC number: NA
Molecular weight: Translated: 52830; Mature: 52830
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVREMLAVLSIVAVTAGLTGCGDDEKGNPVPAPSTQETAPEAKEFGAALKDKVTVDAMMG CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH HLDELQKIADAHGGNRALSTPGYDASVDYVANTLRDKGFDVQTPDFEVRLPFAEKPQLTV HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEE GGRAVEAKALEYTIGTAPQGVEGPLVPARVEDSPGCTASDYDGLPVQGAVVLVDRGECPF CCCEEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCH GVKQAVAAQRGAVALVVVNNVDGEVVSGTLGDDTDVKIPAVSVTKAVGGELRDAPGQTTL HHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCEEECHHHHHHHHCCCCCCCCCCEEE RLEAGVRTDRTRNVIAQTKTGSTSDVVMVGAHLDSVPEGPGINDNGSGVAAILETALQLG EEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC VDPDVRNTVRFGFWGAEEQGLLGSMDYVQSLNEEQLKDISLYLNFDMLGSPNPGYFTYDG CCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCHHHHCEEEEEEEEEECCCCCCCEEEECC DQSAPPNPEAGSPRVPEGSAGIERTLMQYLDDAGKPGEDTSFDGRSDYDGFTLAGIPAGG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC LFSGAEEEKTPEQAERWGGEADRPFDPNYHKKEDDLTHIDRTAMEINGGGVAYAVGLYAQ CCCCCCHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCEEEEEEEEEE DQRGRNGIPIRDDRTRHPVES CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVREMLAVLSIVAVTAGLTGCGDDEKGNPVPAPSTQETAPEAKEFGAALKDKVTVDAMMG CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH HLDELQKIADAHGGNRALSTPGYDASVDYVANTLRDKGFDVQTPDFEVRLPFAEKPQLTV HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEE GGRAVEAKALEYTIGTAPQGVEGPLVPARVEDSPGCTASDYDGLPVQGAVVLVDRGECPF CCCEEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCH GVKQAVAAQRGAVALVVVNNVDGEVVSGTLGDDTDVKIPAVSVTKAVGGELRDAPGQTTL HHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCEEECHHHHHHHHCCCCCCCCCCEEE RLEAGVRTDRTRNVIAQTKTGSTSDVVMVGAHLDSVPEGPGINDNGSGVAAILETALQLG EEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC VDPDVRNTVRFGFWGAEEQGLLGSMDYVQSLNEEQLKDISLYLNFDMLGSPNPGYFTYDG CCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCHHHHCEEEEEEEEEECCCCCCCEEEECC DQSAPPNPEAGSPRVPEGSAGIERTLMQYLDDAGKPGEDTSFDGRSDYDGFTLAGIPAGG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC LFSGAEEEKTPEQAERWGGEADRPFDPNYHKKEDDLTHIDRTAMEINGGGVAYAVGLYAQ CCCCCCHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCEEEEEEEEEE DQRGRNGIPIRDDRTRHPVES CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA