| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797528
Identifier: 108797528
GI number: 108797528
Start: 606216
End: 606977
Strand: Direct
Name: 108797528
Synonym: Mmcs_0548
Alternate gene names: NA
Gene position: 606216-606977 (Clockwise)
Preceding gene: 108797527
Following gene: 108797529
Centisome position: 10.63
GC content: 74.54
Gene sequence:
>762_bases GTGACGCGCTATGTGGCGCTCGGTTCGTCCATGGCGGCGGGCCCGGGCATCCGGCCCTCGGCCGACGGCGCGCCGTTCCG TGCGGGTCGGTCGGCGCGCAACTACGCGCATCTGGTGGCCGAACGCCTCGGCCTCGATCTGACCGACGTCACGTACTCGG GGGCCACCACCGCCAACATTCTCGACGAACCCCAGCACGGCACACCGCCGCAGTTCCTGGCGCTCGACGGCACCGAGACG CTGGTGACGGTGACGATCGGCGGCAACGACGTCGGCTACGTGCCGATGCTGATGGCCGCGGGGCTCCCGCGGGTGGTCCG CTGGCTGCCGCCGGTGTCGACACTGTTCGACCCCACCGCCCGCGACCGCGCACTGGTCGAGGTCGGGGAATCGCTGCACC GCGTCGCTCGCACGGTACGGGCGCGCGCGCCGCGGGCGCGGGTGCTGTTCGTCGACTACCTGACCCTGCTGCCGCCACCG GGCGAGCCGGTCGCCCCGCTGTCGGACGCCGATGCGGCGCTGGGCCGGCGGATCGCCGACACGCTCGAGCGGTTGACCGG CCGGGCCGCCGCCGACACGGGGTGCGGTTGGATCCGGGCCGCGCAGGCCAGCCGTGCGCACCACGCGTGGTCGTCCGAAC CGTGGACGACCGGCCCGGGTCTGCCGTGGCCGGGCCGGCCTGCGCCCCTGCACCCCAACGCCGCCGGTATGCGCGCGGTG GCGGATCTGATCGTCGACGCGGTGGAGTCCCGCGATGATTGA
Upstream 100 bases:
>100_bases TGGCCGCCGCGATGGCCGCCGCCGTGACCGCAGGACACCTGGCCCGCCACGCCGGCCGCATCCCGAAGCGGTTCTGGGCG CAGGCGTCGAGTCCTGCGCT
Downstream 100 bases:
>100_bases GCTGACCGGCCTGACCAAGAGATTCGGCCGGGTCCGTGCCGTCGACGACCTCACGTGCACGGTCGAACCGGGCGTCGTCA CCGGATTCCTCGGCCCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: GDSL Family Lipase; Lipolytic Protein G-D-S-L Family; Esterase; Hydrolase; GDSL-Like Lipase/Acylhydrolase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTRYVALGSSMAAGPGIRPSADGAPFRAGRSARNYAHLVAERLGLDLTDVTYSGATTANILDEPQHGTPPQFLALDGTET LVTVTIGGNDVGYVPMLMAAGLPRVVRWLPPVSTLFDPTARDRALVEVGESLHRVARTVRARAPRARVLFVDYLTLLPPP GEPVAPLSDADAALGRRIADTLERLTGRAAADTGCGWIRAAQASRAHHAWSSEPWTTGPGLPWPGRPAPLHPNAAGMRAV ADLIVDAVESRDD
Sequences:
>Translated_253_residues MTRYVALGSSMAAGPGIRPSADGAPFRAGRSARNYAHLVAERLGLDLTDVTYSGATTANILDEPQHGTPPQFLALDGTET LVTVTIGGNDVGYVPMLMAAGLPRVVRWLPPVSTLFDPTARDRALVEVGESLHRVARTVRARAPRARVLFVDYLTLLPPP GEPVAPLSDADAALGRRIADTLERLTGRAAADTGCGWIRAAQASRAHHAWSSEPWTTGPGLPWPGRPAPLHPNAAGMRAV ADLIVDAVESRDD >Mature_252_residues TRYVALGSSMAAGPGIRPSADGAPFRAGRSARNYAHLVAERLGLDLTDVTYSGATTANILDEPQHGTPPQFLALDGTETL VTVTIGGNDVGYVPMLMAAGLPRVVRWLPPVSTLFDPTARDRALVEVGESLHRVARTVRARAPRARVLFVDYLTLLPPPG EPVAPLSDADAALGRRIADTLERLTGRAAADTGCGWIRAAQASRAHHAWSSEPWTTGPGLPWPGRPAPLHPNAAGMRAVA DLIVDAVESRDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26785; Mature: 26653
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYVALGSSMAAGPGIRPSADGAPFRAGRSARNYAHLVAERLGLDLTDVTYSGATTANI CCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCHHHH LDEPQHGTPPQFLALDGTETLVTVTIGGNDVGYVPMLMAAGLPRVVRWLPPVSTLFDPTA CCCCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHCCCHHHHHCCCH RDRALVEVGESLHRVARTVRARAPRARVLFVDYLTLLPPPGEPVAPLSDADAALGRRIAD HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHH TLERLTGRAAADTGCGWIRAAQASRAHHAWSSEPWTTGPGLPWPGRPAPLHPNAAGMRAV HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ADLIVDAVESRDD HHHHHHHHHCCCC >Mature Secondary Structure TRYVALGSSMAAGPGIRPSADGAPFRAGRSARNYAHLVAERLGLDLTDVTYSGATTANI CEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCHHHH LDEPQHGTPPQFLALDGTETLVTVTIGGNDVGYVPMLMAAGLPRVVRWLPPVSTLFDPTA CCCCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHCCCHHHHHCCCH RDRALVEVGESLHRVARTVRARAPRARVLFVDYLTLLPPPGEPVAPLSDADAALGRRIAD HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHH TLERLTGRAAADTGCGWIRAAQASRAHHAWSSEPWTTGPGLPWPGRPAPLHPNAAGMRAV HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ADLIVDAVESRDD HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA