| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is thiO/thiG [H]
Identifier: 108797525
GI number: 108797525
Start: 604241
End: 605257
Strand: Direct
Name: thiO/thiG [H]
Synonym: Mmcs_0545
Alternate gene names: 108797525
Gene position: 604241-605257 (Clockwise)
Preceding gene: 108797523
Following gene: 108797526
Centisome position: 10.59
GC content: 72.66
Gene sequence:
>1017_bases ATGCCACCGGACAGCACCCTCGCCGTCATCGGCGGCGGGGTCATCGGCCTGTCGGTCGCGCGCCGCGCCGCGCTCGACGG TTGGTCGGTGCGGGTGCACCGCAGCCCCGCCAAGGGCGCGTCATGGGTGGCAGGCGGGATGCTCGCCCCGCACAGCGAGG GCTGGCCGGGGGAACACGAACTGCTGCGCATCGGGCTGGATTCGCTGCGGCTGTGGCATGGCGGCTTCCTCGAGGGACTG CCCGACGAGGTGGTGACCGCCCGGGAGTCACTGGTGGTGGCCGTGGACCGGGCCGACGCCGCCGATCTCAAGACCGTCGG TGAATGGCTGGCCGTCCAGGGCCACCCTGTCACGTTCACGACGGCGGCCCGTGACATCGAACCGCTGCTGGCGCAGGGCA TCCGGCACGGGTTCGTCGCCGACACCGAACTGGCCGTCGACAACCGCGCCGTCGTGGACGCGTTGGAGGCGCACTGCACC CGACTCGGGGTGCGGTGGGCGCCGCCGGTCGACGATCTGGCTGCCGTCGACGACGTGGACCTGCGGGTGCTCGCCAACGG CGTCGACGCACCGACGTTGTGGCCCGGGCTGCCGATCCGCCCGGTGAAAGGGGAGGTGCTGCGCCTGCGTTGGCGGCGCG GGTGTATGCCTGCCCCGCGCCGGGTGGTTCGCGCCCGCGTCCACGGCAGGCAGGTGTATCTGGTGCCGCGCGCCGACGGC GTGGTCGTCGGCGCGACCCAGTACGAACACGGGCGCGACACCGCACCCGCGGTGACCGGGGTTCGCGATCTGCTCGACGA CGCGTGCACGGTCATGCCGGCACTGGGGGAATACGAGTTCGCCGAATGCGCGGCGGGGCTGCGGCCGATGACGCCCGACG GGTTGCCTCTTGTCGAGTGGCTCGACGAGCGCACACTGGTGGCGGCAGGGCACGGCCGCAACGGCTTCCTGCTCGCGCCG TGGACCGCCGAGCGGGTCTCCGCCGAACTGCAGACGACACAGGGAGCCAGGACATGA
Upstream 100 bases:
>100_bases GCCGACACGGGAGTCCCGGGACAGCGGGACTGAGAGTGGGCCAGACGATCCGGCCCTTACCGTCGGACCTGATCCGGGTC ATGCCGGCGAAGGGAGGGCC
Downstream 100 bases:
>100_bases GGAGTCACGGATGAGGATCGTGGTGAACAACGAAGACGTCCACCTCGACGAGCAGACCACGGTCGCGCAGCTGGTGGCTC GAATGGGGTTCCCGGAGAAG
Product: glycine oxidase ThiO
Products: NA
Alternate protein names: Probable FAD-dependent glycine oxidase; Thiazole synthase [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MPPDSTLAVIGGGVIGLSVARRAALDGWSVRVHRSPAKGASWVAGGMLAPHSEGWPGEHELLRIGLDSLRLWHGGFLEGL PDEVVTARESLVVAVDRADAADLKTVGEWLAVQGHPVTFTTAARDIEPLLAQGIRHGFVADTELAVDNRAVVDALEAHCT RLGVRWAPPVDDLAAVDDVDLRVLANGVDAPTLWPGLPIRPVKGEVLRLRWRRGCMPAPRRVVRARVHGRQVYLVPRADG VVVGATQYEHGRDTAPAVTGVRDLLDDACTVMPALGEYEFAECAAGLRPMTPDGLPLVEWLDERTLVAAGHGRNGFLLAP WTAERVSAELQTTQGART
Sequences:
>Translated_338_residues MPPDSTLAVIGGGVIGLSVARRAALDGWSVRVHRSPAKGASWVAGGMLAPHSEGWPGEHELLRIGLDSLRLWHGGFLEGL PDEVVTARESLVVAVDRADAADLKTVGEWLAVQGHPVTFTTAARDIEPLLAQGIRHGFVADTELAVDNRAVVDALEAHCT RLGVRWAPPVDDLAAVDDVDLRVLANGVDAPTLWPGLPIRPVKGEVLRLRWRRGCMPAPRRVVRARVHGRQVYLVPRADG VVVGATQYEHGRDTAPAVTGVRDLLDDACTVMPALGEYEFAECAAGLRPMTPDGLPLVEWLDERTLVAAGHGRNGFLLAP WTAERVSAELQTTQGART >Mature_337_residues PPDSTLAVIGGGVIGLSVARRAALDGWSVRVHRSPAKGASWVAGGMLAPHSEGWPGEHELLRIGLDSLRLWHGGFLEGLP DEVVTARESLVVAVDRADAADLKTVGEWLAVQGHPVTFTTAARDIEPLLAQGIRHGFVADTELAVDNRAVVDALEAHCTR LGVRWAPPVDDLAAVDDVDLRVLANGVDAPTLWPGLPIRPVKGEVLRLRWRRGCMPAPRRVVRARVHGRQVYLVPRADGV VVGATQYEHGRDTAPAVTGVRDLLDDACTVMPALGEYEFAECAAGLRPMTPDGLPLVEWLDERTLVAAGHGRNGFLLAPW TAERVSAELQTTQGART
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the thiG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006076 - InterPro: IPR012727 - InterPro: IPR008867 [H]
Pfam domain/function: PF01266 DAO; PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 36262; Mature: 36131
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPDSTLAVIGGGVIGLSVARRAALDGWSVRVHRSPAKGASWVAGGMLAPHSEGWPGEHE CCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCHHH LLRIGLDSLRLWHGGFLEGLPDEVVTARESLVVAVDRADAADLKTVGEWLAVQGHPVTFT HHHHHHHHHHHHCCCHHCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHEECCCCEEEE TAARDIEPLLAQGIRHGFVADTELAVDNRAVVDALEAHCTRLGVRWAPPVDDLAAVDDVD CCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCC LRVLANGVDAPTLWPGLPIRPVKGEVLRLRWRRGCMPAPRRVVRARVHGRQVYLVPRADG EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCC VVVGATQYEHGRDTAPAVTGVRDLLDDACTVMPALGEYEFAECAAGLRPMTPDGLPLVEW EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHH LDERTLVAAGHGRNGFLLAPWTAERVSAELQTTQGART CCCCEEEEECCCCCCCEECCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure PPDSTLAVIGGGVIGLSVARRAALDGWSVRVHRSPAKGASWVAGGMLAPHSEGWPGEHE CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCHHH LLRIGLDSLRLWHGGFLEGLPDEVVTARESLVVAVDRADAADLKTVGEWLAVQGHPVTFT HHHHHHHHHHHHCCCHHCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHEECCCCEEEE TAARDIEPLLAQGIRHGFVADTELAVDNRAVVDALEAHCTRLGVRWAPPVDDLAAVDDVD CCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCC LRVLANGVDAPTLWPGLPIRPVKGEVLRLRWRRGCMPAPRRVVRARVHGRQVYLVPRADG EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCC VVVGATQYEHGRDTAPAVTGVRDLLDDACTVMPALGEYEFAECAAGLRPMTPDGLPLVEW EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHH LDERTLVAAGHGRNGFLLAPWTAERVSAELQTTQGART CCCCEEEEECCCCCCCEECCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]