Click here to switch to the map view.

The map label for this gene is 108797036

Identifier: 108797036

GI number: 108797036

Start: 66393

End: 66887

Strand: Reverse

Name: 108797036

Synonym: Mmcs_0055

Alternate gene names: NA

Gene position: 66887-66393 (Counterclockwise)

Preceding gene: 108797038

Following gene: 108797035

Centisome position: 1.17

GC content: 64.85

Gene sequence:

>495_bases
ATGACGAACTGGATCAACACAGTGAGCCGCGACCACGTCGAACGTGCTGTTCGCGGGCGTTTCACACAGGCGAACCACGG
TAAGCCCCAAGCGCTGCGCCGCATGGCGCGGGGCGACTGGATCATCTTCTACTCACCGCGCGTCACCTATCCCGACGGCG
CCCAGCTGCAGGCGTTCACCGCGATCGGTCAGGTGGTCGACGACGAGCCCTATCAGGCGTCCACCGAGGATGAGGTGTGG
CGGCGCAACGTCGACTTCCTCGACTGCGCGGAGACACCGATCCGCCCCCTCATCGACGCCCTCGACTTCATCGAGAACAA
ACAGCGCTGGGGATACAAATTCCGCTTCGGTGTGTTCCGCATCGACGACCACGACTTCGAGACCATCCGGTCGGCGATGA
CGCGTTCGCCCGAACTGATCGGGGCATCGACGGTCAGCGACGCCGCCGGCGGGGTACCCGGACAGACGGCAGCACCGCCG
AACGACACCGACTGA

Upstream 100 bases:

>100_bases
TTGTCCGTGCGGCGCTTCGCCCATCCCCAATGCGCCGCCTGTCCACAGGCCCTGTGGATCATGCCCACCACCTGTCGGGA
CCGGCGCTTAGCGTCGACGC

Downstream 100 bases:

>100_bases
TCAGGAGAGCCCGTGACCACCGACAAGACCGGCGCGTCCACCACCGTCAAGGCCGAAGCCGACCGATTCACCATCGGCGT
GGAGGGTCAGACGGTCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTNWINTVSRDHVERAVRGRFTQANHGKPQALRRMARGDWIIFYSPRVTYPDGAQLQAFTAIGQVVDDEPYQASTEDEVW
RRNVDFLDCAETPIRPLIDALDFIENKQRWGYKFRFGVFRIDDHDFETIRSAMTRSPELIGASTVSDAAGGVPGQTAAPP
NDTD

Sequences:

>Translated_164_residues
MTNWINTVSRDHVERAVRGRFTQANHGKPQALRRMARGDWIIFYSPRVTYPDGAQLQAFTAIGQVVDDEPYQASTEDEVW
RRNVDFLDCAETPIRPLIDALDFIENKQRWGYKFRFGVFRIDDHDFETIRSAMTRSPELIGASTVSDAAGGVPGQTAAPP
NDTD
>Mature_163_residues
TNWINTVSRDHVERAVRGRFTQANHGKPQALRRMARGDWIIFYSPRVTYPDGAQLQAFTAIGQVVDDEPYQASTEDEVWR
RNVDFLDCAETPIRPLIDALDFIENKQRWGYKFRFGVFRIDDHDFETIRSAMTRSPELIGASTVSDAAGGVPGQTAAPPN
DTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0310 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002740
- InterPro:   IPR015947
- InterPro:   IPR022996 [H]

Pfam domain/function: PF01878 DUF55 [H]

EC number: NA

Molecular weight: Translated: 18576; Mature: 18445

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNWINTVSRDHVERAVRGRFTQANHGKPQALRRMARGDWIIFYSPRVTYPDGAQLQAFT
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCEECCCCCCCHHHHH
AIGQVVDDEPYQASTEDEVWRRNVDFLDCAETPIRPLIDALDFIENKQRWGYKFRFGVFR
HHHHHHCCCCCCCCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEE
IDDHDFETIRSAMTRSPELIGASTVSDAAGGVPGQTAAPPNDTD
ECCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNWINTVSRDHVERAVRGRFTQANHGKPQALRRMARGDWIIFYSPRVTYPDGAQLQAFT
CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCEECCCCCCCHHHHH
AIGQVVDDEPYQASTEDEVWRRNVDFLDCAETPIRPLIDALDFIENKQRWGYKFRFGVFR
HHHHHHCCCCCCCCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEE
IDDHDFETIRSAMTRSPELIGASTVSDAAGGVPGQTAAPPNDTD
ECCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA