| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797016
Identifier: 108797016
GI number: 108797016
Start: 44953
End: 45942
Strand: Direct
Name: 108797016
Synonym: Mmcs_0035
Alternate gene names: NA
Gene position: 44953-45942 (Clockwise)
Preceding gene: 108797015
Following gene: 108797020
Centisome position: 0.79
GC content: 66.16
Gene sequence:
>990_bases ATGTCAGAAAACCTCTGTGTAAAGACACCTTTCAGTGACCTTCGCTACCTGGTTGACTGCCTGGGACCCCTCACGCGACG GGATTCTGGGCCCTGCTCGCTCGTTCGCCGGCGCAGGCACGAAGCCATCAGCCTGTCGGTACCCGTAGCTAGAATGGGCC AACGCAGTGAGTGGGGGCTCGGGATGGGTAGCAAGCGTTCATCCGACGGATCCGGCGCCATCGGTGGCGCCATCTTCTTC GTCATCGTGCTCATCGCCATGGTGCCCAAACCCGTCTGGATCGCCATCGGCATCGGCGTCGCGGTGATCGTGCTCGGCTG GGTCGCCTACCGCATTTTCGAGGCGGTGGAGAAGAGCCGTGCAGAGGCGGCGGAACGCGAACGCGCGGAGCAGGCAGCGC GAGCGGCCGCCGCGAAGCGGGAGCGCGAAGAGCGGGCGCGCACGGAGAAGCAACGGCGTATCGACACCCTCGGTAAAGCG AATGCGGCGCTGGTCGAATCCGCCCTACGAGCGGTGAAACAGATCGCCGGCTCCGAAGCCGCCCGCGCAGGCTGGCTGGG TGACGTCGACTTCACCGCCGACATCCGGGGGATCACCGAGAACTTCCAGAAGGCGCACGCCCTACGCGGCGTGGCGGGCA AGCTGTCCGCACTGGACAAACCGAGTGCCGAGGACCGCGTGATCCTCGCCGAGGCGAAGACCACCGCCGCCAATCTCGAA CGCACCGCGATCGAGCGCGTCGAGCTGGTCGGCAAGTGCGCGGTAGAAGCCCAACTCATCGACAAGTCGCTACGCACCGA ACGCGAGGATGCGCGGGTCGCGGAGCAGCGCGCGGAACTGCACGCGAAGCTGAGCGCCATGCTGTACGGCATCGAGGCCG CGCCGAACACCACACCCGAGGACTCCGCGGTCGACGCCGTGATGGCCCGAGTGCAGGCCTACCGGGAGATCAAGTATCAG ATCGAACAGGCACGCGACGGCCAGTCCTGA
Upstream 100 bases:
>100_bases TACCGCCGAAGGCCGTCCGATCCAGATCGCCCGGGTTAGCGAAACCGCGCACGCGCGCACTCGGTGACCGCCCGCAGCCG TCTAGTGAGGCAAACTATCC
Downstream 100 bases:
>100_bases TCACGCAGCGGTCCGCCGCGGTACTCAGCGCGCCAGCAGATCCTTGAGGGCGGCGTCGATGAACTGGTTGTCGGCGGGGT TCGCGTCCCCACCGGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSENLCVKTPFSDLRYLVDCLGPLTRRDSGPCSLVRRRRHEAISLSVPVARMGQRSEWGLGMGSKRSSDGSGAIGGAIFF VIVLIAMVPKPVWIAIGIGVAVIVLGWVAYRIFEAVEKSRAEAAERERAEQAARAAAAKREREERARTEKQRRIDTLGKA NAALVESALRAVKQIAGSEAARAGWLGDVDFTADIRGITENFQKAHALRGVAGKLSALDKPSAEDRVILAEAKTTAANLE RTAIERVELVGKCAVEAQLIDKSLRTEREDARVAEQRAELHAKLSAMLYGIEAAPNTTPEDSAVDAVMARVQAYREIKYQ IEQARDGQS
Sequences:
>Translated_329_residues MSENLCVKTPFSDLRYLVDCLGPLTRRDSGPCSLVRRRRHEAISLSVPVARMGQRSEWGLGMGSKRSSDGSGAIGGAIFF VIVLIAMVPKPVWIAIGIGVAVIVLGWVAYRIFEAVEKSRAEAAERERAEQAARAAAAKREREERARTEKQRRIDTLGKA NAALVESALRAVKQIAGSEAARAGWLGDVDFTADIRGITENFQKAHALRGVAGKLSALDKPSAEDRVILAEAKTTAANLE RTAIERVELVGKCAVEAQLIDKSLRTEREDARVAEQRAELHAKLSAMLYGIEAAPNTTPEDSAVDAVMARVQAYREIKYQ IEQARDGQS >Mature_328_residues SENLCVKTPFSDLRYLVDCLGPLTRRDSGPCSLVRRRRHEAISLSVPVARMGQRSEWGLGMGSKRSSDGSGAIGGAIFFV IVLIAMVPKPVWIAIGIGVAVIVLGWVAYRIFEAVEKSRAEAAERERAEQAARAAAAKREREERARTEKQRRIDTLGKAN AALVESALRAVKQIAGSEAARAGWLGDVDFTADIRGITENFQKAHALRGVAGKLSALDKPSAEDRVILAEAKTTAANLER TAIERVELVGKCAVEAQLIDKSLRTEREDARVAEQRAELHAKLSAMLYGIEAAPNTTPEDSAVDAVMARVQAYREIKYQI EQARDGQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35819; Mature: 35688
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENLCVKTPFSDLRYLVDCLGPLTRRDSGPCSLVRRRRHEAISLSVPVARMGQRSEWGL CCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCHHHCCCCCCCCC GMGSKRSSDGSGAIGGAIFFVIVLIAMVPKPVWIAIGIGVAVIVLGWVAYRIFEAVEKSR CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAAERERAEQAARAAAAKREREERARTEKQRRIDTLGKANAALVESALRAVKQIAGSEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHH ARAGWLGDVDFTADIRGITENFQKAHALRGVAGKLSALDKPSAEDRVILAEAKTTAANLE HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHH RTAIERVELVGKCAVEAQLIDKSLRTEREDARVAEQRAELHAKLSAMLYGIEAAPNTTPE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DSAVDAVMARVQAYREIKYQIEQARDGQS HHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SENLCVKTPFSDLRYLVDCLGPLTRRDSGPCSLVRRRRHEAISLSVPVARMGQRSEWGL CCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCHHHCCCCCCCCC GMGSKRSSDGSGAIGGAIFFVIVLIAMVPKPVWIAIGIGVAVIVLGWVAYRIFEAVEKSR CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAAERERAEQAARAAAAKREREERARTEKQRRIDTLGKANAALVESALRAVKQIAGSEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHH ARAGWLGDVDFTADIRGITENFQKAHALRGVAGKLSALDKPSAEDRVILAEAKTTAANLE HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHH RTAIERVELVGKCAVEAQLIDKSLRTEREDARVAEQRAELHAKLSAMLYGIEAAPNTTPE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DSAVDAVMARVQAYREIKYQIEQARDGQS HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA