| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797006
Identifier: 108797006
GI number: 108797006
Start: 33798
End: 35609
Strand: Reverse
Name: 108797006
Synonym: Mmcs_0025
Alternate gene names: NA
Gene position: 35609-33798 (Counterclockwise)
Preceding gene: 108797014
Following gene: 108797002
Centisome position: 0.62
GC content: 53.59
Gene sequence:
>1812_bases GTGGCCAGCCCACAACGGCTGCCGACGGCCACGGTGGTCTGCTCGGGTAGGAAGCAGCCCCAATCACGATTTACCGGTTA CGCGTTAACCGTGATTGACACGCAAGCCGTCTTTAATATGGCACTATTCAACCTCCGGCAGGTAGAAAGGCGTCTCATGG TTACGGCAGCCGAGATGATCACTGCAGATGCGTTAGCCTGCGGACACGCGCTGTCATTCGAAGATCAGCCGATTCTCGGG CAAGTATTCACCACGCTGAAGAAGCGCCAAAAGCACCTCACCCTCATTCTTGGCGCCGGGGTCTCCATGAACGCCTCGCT ACCTTCATGGAGCACGCTTGTCCGAGACATGTCGAAGTCTGTCAAGGACGCAAAGCTGAGTCAGATGCTGCGAGAAGTTA CCGGTGACAGTCTGGAAAGAAAAGCTGAAACGACGATACAAATCGCGTGCGCTCTGAATAAGAATATTGATGCGGCACAG ATCATACGCGACGCGCTATACAATGCTGAAGAAATCCCGAAACCAGGGCTACTAGCATCCTCTATTGGCAGGCTGATTGC GGAGTACTTCCCTGCGGTATCCGTTTTGACTACCAATTTTGACCTCATCATGGAGGAGGCAGTGTCAGCGTATCTACCGG GCATTGCAATTACGCCATACTCTATGGACACGTACTCGGATTGGGAAGCATCCGAAGGTACCGATACTGAACTCGGAGTT CTTCATCTTCATGGTGTAGTTCGACAAGGTGGTCTATCACCCTCGGGCCCTATTGTACTGACAGACAGCGATTTCCTTGA ACACGGTGCCCAAGTTCGATCCGCCGTAGGTAAGGCGATAAATTCGGGGGTGGCGCTATTCGTCGGCTTGAGCCTGACGG ACCCCAACATCGTCGGTCCGCTGTACGAAGCAGCGGGTCACGCTAGTTCGGAGCGGTATGGATTGTTCGTACCAAGGCTA TATGGCGATGACTTCACGCCGACCGAGTACGCAAAATATGCGCTCTCGGGCGCAGAATTCCTGCGCCGAAAACTGCATCT TCGACCAATTTTCATGAAGTCATATTCTCAGTTGACTCAACTGATATCTGAGTTCGGCTTGGCTGTCGCTGAGCCAAAAC TCTATCGACGTAACGGTCCGAAGGCTACGTCTCTGCACTATGGTTTTAGATTCAAGGAAGCTCTGAGTGCCGCCTATACT GCAGTAGGCGCCAATACTCGCACGGGCGATCTAGCCTCCGATAGTGCACTGAAATTGAGCCGCAAACTTCACTCATCATT CCATGCCAAGAACGGTCCGATGTGGCTGCTGGACGCGTTTCGCAAACGGCACGCCGCTGATGTTTCGCTCGAAGAGAATT TTGGGATATTTCTCTGGCTTCGATCTTTAGATAGCCCGCCAGAGAAAAAGTACGCGCTCAAGTTGCTCGGGACTTCTGTT TACACACACTTGGAAGCCTGGTCTGCGAAGCGCGAGGAACACATTACGGCTCACTCGAACTATGCTGCAATCCACGCGAT CTACGAAGGCGGCGTGAAGGTCGAGAATCTCGACCCGAGCCGCAACGGGGGAACTTGGCGCTCAGCTCTAGCAGTCCCTG TCGTAGTAACCCAGTCCCGAAGTTTACTCTTACGGGGAGGCGACCCGTTGGATAGCCTCACTATCGGCGCGATCACACTG GACAGCAACAAACCTGTCGAGCCGATCGACTCGGCATCCAGCGACCGCTCTGTCATTGGAGCGTTAGAGTCAGACGAGTT TCAACAGCTCATCGACGCTCTCGATCGACTTGCAGGTGATGTACTGACGTAG
Upstream 100 bases:
>100_bases ATCGAGCCTGCTGCCCAGCGAAATAGGTGCATGGTGGCTGCCGGTCAGCTAGTACAGGCGTCTGCCTACGAAGTCGCGGG TCGGCCCATATGCAATCAGT
Downstream 100 bases:
>100_bases GTCCTAGGAAGACTTAGATTTCGCTTTGAATCCGGAGATCTTCACCGGCACCGAGATCACGGTACGACCGTTCACGACCG AGCGAGTGCCGGAGTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MASPQRLPTATVVCSGRKQPQSRFTGYALTVIDTQAVFNMALFNLRQVERRLMVTAAEMITADALACGHALSFEDQPILG QVFTTLKKRQKHLTLILGAGVSMNASLPSWSTLVRDMSKSVKDAKLSQMLREVTGDSLERKAETTIQIACALNKNIDAAQ IIRDALYNAEEIPKPGLLASSIGRLIAEYFPAVSVLTTNFDLIMEEAVSAYLPGIAITPYSMDTYSDWEASEGTDTELGV LHLHGVVRQGGLSPSGPIVLTDSDFLEHGAQVRSAVGKAINSGVALFVGLSLTDPNIVGPLYEAAGHASSERYGLFVPRL YGDDFTPTEYAKYALSGAEFLRRKLHLRPIFMKSYSQLTQLISEFGLAVAEPKLYRRNGPKATSLHYGFRFKEALSAAYT AVGANTRTGDLASDSALKLSRKLHSSFHAKNGPMWLLDAFRKRHAADVSLEENFGIFLWLRSLDSPPEKKYALKLLGTSV YTHLEAWSAKREEHITAHSNYAAIHAIYEGGVKVENLDPSRNGGTWRSALAVPVVVTQSRSLLLRGGDPLDSLTIGAITL DSNKPVEPIDSASSDRSVIGALESDEFQQLIDALDRLAGDVLT
Sequences:
>Translated_603_residues MASPQRLPTATVVCSGRKQPQSRFTGYALTVIDTQAVFNMALFNLRQVERRLMVTAAEMITADALACGHALSFEDQPILG QVFTTLKKRQKHLTLILGAGVSMNASLPSWSTLVRDMSKSVKDAKLSQMLREVTGDSLERKAETTIQIACALNKNIDAAQ IIRDALYNAEEIPKPGLLASSIGRLIAEYFPAVSVLTTNFDLIMEEAVSAYLPGIAITPYSMDTYSDWEASEGTDTELGV LHLHGVVRQGGLSPSGPIVLTDSDFLEHGAQVRSAVGKAINSGVALFVGLSLTDPNIVGPLYEAAGHASSERYGLFVPRL YGDDFTPTEYAKYALSGAEFLRRKLHLRPIFMKSYSQLTQLISEFGLAVAEPKLYRRNGPKATSLHYGFRFKEALSAAYT AVGANTRTGDLASDSALKLSRKLHSSFHAKNGPMWLLDAFRKRHAADVSLEENFGIFLWLRSLDSPPEKKYALKLLGTSV YTHLEAWSAKREEHITAHSNYAAIHAIYEGGVKVENLDPSRNGGTWRSALAVPVVVTQSRSLLLRGGDPLDSLTIGAITL DSNKPVEPIDSASSDRSVIGALESDEFQQLIDALDRLAGDVLT >Mature_602_residues ASPQRLPTATVVCSGRKQPQSRFTGYALTVIDTQAVFNMALFNLRQVERRLMVTAAEMITADALACGHALSFEDQPILGQ VFTTLKKRQKHLTLILGAGVSMNASLPSWSTLVRDMSKSVKDAKLSQMLREVTGDSLERKAETTIQIACALNKNIDAAQI IRDALYNAEEIPKPGLLASSIGRLIAEYFPAVSVLTTNFDLIMEEAVSAYLPGIAITPYSMDTYSDWEASEGTDTELGVL HLHGVVRQGGLSPSGPIVLTDSDFLEHGAQVRSAVGKAINSGVALFVGLSLTDPNIVGPLYEAAGHASSERYGLFVPRLY GDDFTPTEYAKYALSGAEFLRRKLHLRPIFMKSYSQLTQLISEFGLAVAEPKLYRRNGPKATSLHYGFRFKEALSAAYTA VGANTRTGDLASDSALKLSRKLHSSFHAKNGPMWLLDAFRKRHAADVSLEENFGIFLWLRSLDSPPEKKYALKLLGTSVY THLEAWSAKREEHITAHSNYAAIHAIYEGGVKVENLDPSRNGGTWRSALAVPVVVTQSRSLLLRGGDPLDSLTIGAITLD SNKPVEPIDSASSDRSVIGALESDEFQQLIDALDRLAGDVLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65661; Mature: 65529
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPQRLPTATVVCSGRKQPQSRFTGYALTVIDTQAVFNMALFNLRQVERRLMVTAAEMI CCCCCCCCCEEEEECCCCCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH TADALACGHALSFEDQPILGQVFTTLKKRQKHLTLILGAGVSMNASLPSWSTLVRDMSKS HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHHH VKDAKLSQMLREVTGDSLERKAETTIQIACALNKNIDAAQIIRDALYNAEEIPKPGLLAS HHHHHHHHHHHHHCCCHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCHHHCCCCCHHHH SIGRLIAEYFPAVSVLTTNFDLIMEEAVSAYLPGIAITPYSMDTYSDWEASEGTDTELGV HHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEH LHLHGVVRQGGLSPSGPIVLTDSDFLEHGAQVRSAVGKAINSGVALFVGLSLTDPNIVGP HHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHH LYEAAGHASSERYGLFVPRLYGDDFTPTEYAKYALSGAEFLRRKLHLRPIFMKSYSQLTQ HHHHCCCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LISEFGLAVAEPKLYRRNGPKATSLHYGFRFKEALSAAYTAVGANTRTGDLASDSALKLS HHHHHCCCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH RKLHSSFHAKNGPMWLLDAFRKRHAADVSLEENFGIFLWLRSLDSPPEKKYALKLLGTSV HHHHHHHCCCCCCCHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHH YTHLEAWSAKREEHITAHSNYAAIHAIYEGGVKVENLDPSRNGGTWRSALAVPVVVTQSR HHHHHHHHHHHHHCCEECCCCEEEEEEECCCEEEECCCCCCCCCCHHHHHEEEEEEECCC SLLLRGGDPLDSLTIGAITLDSNKPVEPIDSASSDRSVIGALESDEFQQLIDALDRLAGD EEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHH VLT CCC >Mature Secondary Structure ASPQRLPTATVVCSGRKQPQSRFTGYALTVIDTQAVFNMALFNLRQVERRLMVTAAEMI CCCCCCCCEEEEECCCCCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH TADALACGHALSFEDQPILGQVFTTLKKRQKHLTLILGAGVSMNASLPSWSTLVRDMSKS HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHHH VKDAKLSQMLREVTGDSLERKAETTIQIACALNKNIDAAQIIRDALYNAEEIPKPGLLAS HHHHHHHHHHHHHCCCHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCHHHCCCCCHHHH SIGRLIAEYFPAVSVLTTNFDLIMEEAVSAYLPGIAITPYSMDTYSDWEASEGTDTELGV HHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEH LHLHGVVRQGGLSPSGPIVLTDSDFLEHGAQVRSAVGKAINSGVALFVGLSLTDPNIVGP HHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHH LYEAAGHASSERYGLFVPRLYGDDFTPTEYAKYALSGAEFLRRKLHLRPIFMKSYSQLTQ HHHHCCCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LISEFGLAVAEPKLYRRNGPKATSLHYGFRFKEALSAAYTAVGANTRTGDLASDSALKLS HHHHHCCCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH RKLHSSFHAKNGPMWLLDAFRKRHAADVSLEENFGIFLWLRSLDSPPEKKYALKLLGTSV HHHHHHHCCCCCCCHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHH YTHLEAWSAKREEHITAHSNYAAIHAIYEGGVKVENLDPSRNGGTWRSALAVPVVVTQSR HHHHHHHHHHHHHCCEECCCCEEEEEEECCCEEEECCCCCCCCCCHHHHHEEEEEEECCC SLLLRGGDPLDSLTIGAITLDSNKPVEPIDSASSDRSVIGALESDEFQQLIDALDRLAGD EEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHH VLT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA