| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108796993
Identifier: 108796993
GI number: 108796993
Start: 14951
End: 15235
Strand: Reverse
Name: 108796993
Synonym: Mmcs_0012
Alternate gene names: NA
Gene position: 15235-14951 (Counterclockwise)
Preceding gene: 108796996
Following gene: 108796992
Centisome position: 0.27
GC content: 63.51
Gene sequence:
>285_bases ATGCCCAAGTCGAAGGTCCGCAAGAAGAACGACTTCACCATCAGTCCGGTCAGCCGGACGCCGGTGAAGGTGAAGGCCGG CCCGTCGAGCGTGTGGTTCGTCGCCCTGTTCGTCGGGCTGATGCTCATCGGGTTGATCTGGCTGCTGGTGTTCCAGCTCG CCGCGACCAACCCGGTCGACGCACCCGGGATGCTGCAGTGGATGGCCGACCTCGGCCCGTGGAACTACGCGATCGCTTTT GCCTTCATGATCACGGGTCTGTTGCTCACGATGCGGTGGCGCTGA
Upstream 100 bases:
>100_bases GGTCCTGCGTTAGGCTCAGGGGGCATCTGCACCATCGTCGCATCTCGGAGCCGGTCAGCGCACCGGTGGAACTGCGACGC CGACAGCCACGAAGGTGACC
Downstream 100 bases:
>100_bases GCCCCCAACCGGGCGGAATGAATTCATTCCGCGCCCGGCTGGCGTGTAACACAGCAACGCCAGGGCCCCGCAATCACATC CGTGTAGTTCATCCCCATTG
Product: putative septation inhibitor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MPKSKVRKKNDFTISPVSRTPVKVKAGPSSVWFVALFVGLMLIGLIWLLVFQLAATNPVDAPGMLQWMADLGPWNYAIAF AFMITGLLLTMRWR
Sequences:
>Translated_94_residues MPKSKVRKKNDFTISPVSRTPVKVKAGPSSVWFVALFVGLMLIGLIWLLVFQLAATNPVDAPGMLQWMADLGPWNYAIAF AFMITGLLLTMRWR >Mature_93_residues PKSKVRKKNDFTISPVSRTPVKVKAGPSSVWFVALFVGLMLIGLIWLLVFQLAATNPVDAPGMLQWMADLGPWNYAIAFA FMITGLLLTMRWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0233 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y012_MYCSJ (A3PSE8)
Other databases:
- EMBL: CP000580 - RefSeq: YP_001068316.1 - STRING: A3PSE8 - EnsemblBacteria: EBMYCT00000050810 - GeneID: 4875758 - GenomeReviews: CP000580_GR - KEGG: mjl:Mjls_0012 - eggNOG: NOG42983 - GeneTree: EBGT00050000015888 - HOGENOM: HBG483368 - OMA: LLMTMGW - ProtClustDB: PRK00159 - BioCyc: MSP164757:MJLS_0012-MONOMER - HAMAP: MF_00631 - InterPro: IPR009619
Pfam domain/function: PF06781 UPF0233
EC number: NA
Molecular weight: Translated: 10539; Mature: 10408
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xbe7c54c)-; HASH(0x11df8bb8)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSKVRKKNDFTISPVSRTPVKVKAGPSSVWFVALFVGLMLIGLIWLLVFQLAATNPVD CCCCCCCCCCCCEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APGMLQWMADLGPWNYAIAFAFMITGLLLTMRWR CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure PKSKVRKKNDFTISPVSRTPVKVKAGPSSVWFVALFVGLMLIGLIWLLVFQLAATNPVD CCCCCCCCCCCEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APGMLQWMADLGPWNYAIAFAFMITGLLLTMRWR CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA