| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108764003
Identifier: 108764003
GI number: 108764003
Start: 6232678
End: 6234096
Strand: Reverse
Name: 108764003
Synonym: MXAN_4984
Alternate gene names: NA
Gene position: 6234096-6232678 (Counterclockwise)
Preceding gene: 108762530
Following gene: 108761016
Centisome position: 68.21
GC content: 68.36
Gene sequence:
>1419_bases ATGAAGTCCGCGAAGTGGGCGGCCCTGCCGCTGTTGCTGCTGGCCGCCTGTGCCACCACGGGGCGCCAGGGCGCTGCTGA CGACTCGCCGCCGCGCCTCATGTCCTGGTCGGAGCAGATCTCCGAGCGCGAAGCCTGGCTGGAGAAGCGCCACGGCATGC TGCTGGACATGATGCGCCGCCATGGCGTGGGCATGTGGGTGGTCGTCAACGAGGAGTTCCACGACGACCCGCTCACCCAG TTCATCGCGCCGCCGCGGCCCTACGCAGGTAACCGGGACATCTTCGTGTTCGTCGACGCCGGGCCCGAGGGGCTCAAGCG CGTCGCGCTCTCCGGCTACTCGGAGGCCACGCTCGCGCGCTTCTTCGAGCTGCCCGAAGAAGGGCGCAAGCCGCAGGAGG TCCTGGCGGACCTGAACACGCGCTATCAGCCCCGGACGATTGCCCTGGGCATTGGCGGCAAGCGCGGGGTGACGCGCAGC CTGACGAAGGACAGCTACGCCTTCCTGGTGGATTCCCTGGGCGCGGAGGCGGAGGCCCGCTTCGTGAGCGCCGCGCCGCT CATCGAGGAGTACCTGGACACGCGCATCCCCGAGGAGTGGCTGCACTACCAGCGACTGGTGATGCTGACGGAGGCCGTGG TGAAGGAGGCTTTCTCTCCGGAGGTGGTGGTGCCGGGGAAGACGACCGTCGGTGACGTGCGCCGCTTCCTCTATGACAGG CTCTGGGCGCTGGGCGTGGACACCTGGTTCCAGCCGGACCTGCGCGTGCAGCGCAAGGGCGCGGACGGCGCCAGCTCGCG AGGCTTCCTGGCGCCCGCGAAGGAGGACGTCGTCATCCTCCGCGGTGACCTGCTGCACGTGGACTTCGGCATCACCTACA TGGGGCTGAACTCCGACTGGCAGAAGATGGCCTACGTGCTCAACGAGGGGGAGACGGACGCGCCGGAGGGCCTCAAGCGG GCGCTGGCCAACACCATCGAACTCCAGGACGCGCTGATGCTGCGCGCCTCCCGTCCGGGCCGCACGTCCGCGCAGGTGTA CACGCAGACGATGGCGGAGATGAAGGAGAAGGGCATCGAGGCCATGGTGTACAGCCACCCGCTGGGCAACCAGGGCCACG CGCTGGGCGCGAGCATCGACTTCCGTTCGGCCAGCCGGCAGGAAGAGGCCAAGACGTTGCGCCTCGGCTCGTACATCGCC ATCGAGCTGAACACCGCCACGTCGGTGCCGGAGTGGGACGGGCAGAAGGTCTTCGTGATGCAGGAGGACCCGGCCTACCT CACCGAGGAGGGCTGGAAGTTCTTCGTGTCCAGGCAGGAGTCGTTCTACCTCCTGGGCCGCGATGGGCAGGGCGGGCAGC GAAGTCAGGGCGCAAAGGGAGGCAAGGGCGTGACGACGCGTGGCATGCCCATGCTCTGA
Upstream 100 bases:
>100_bases CCAGGCCCTCCGTCTCCAGAGAATCCAAGGGCTCTGGAGGCGGAGGCCCCCTGGCTTTCATGCGATACGGTGCGGCCTCC TTCTCGATGGGAGTCCTCAC
Downstream 100 bases:
>100_bases GCCCGGCCTACGCGCCTCGCCCGCTGGCGTCCGCCCACGTGAGTCCGAAGCGGGCCAGGTACTTCTTCAGCCGGTCCGCG TCGTTGACGCTCTTCTTCTG
Product: putative lipoprotein
Products: NA
Alternate protein names: M24 Family Peptidase; Peptidase; Lipoprotein; Xaa-Pro Aminopeptidase; Peptidase M; Metallopeptidase Family M
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MKSAKWAALPLLLLAACATTGRQGAADDSPPRLMSWSEQISEREAWLEKRHGMLLDMMRRHGVGMWVVVNEEFHDDPLTQ FIAPPRPYAGNRDIFVFVDAGPEGLKRVALSGYSEATLARFFELPEEGRKPQEVLADLNTRYQPRTIALGIGGKRGVTRS LTKDSYAFLVDSLGAEAEARFVSAAPLIEEYLDTRIPEEWLHYQRLVMLTEAVVKEAFSPEVVVPGKTTVGDVRRFLYDR LWALGVDTWFQPDLRVQRKGADGASSRGFLAPAKEDVVILRGDLLHVDFGITYMGLNSDWQKMAYVLNEGETDAPEGLKR ALANTIELQDALMLRASRPGRTSAQVYTQTMAEMKEKGIEAMVYSHPLGNQGHALGASIDFRSASRQEEAKTLRLGSYIA IELNTATSVPEWDGQKVFVMQEDPAYLTEEGWKFFVSRQESFYLLGRDGQGGQRSQGAKGGKGVTTRGMPML
Sequences:
>Translated_472_residues MKSAKWAALPLLLLAACATTGRQGAADDSPPRLMSWSEQISEREAWLEKRHGMLLDMMRRHGVGMWVVVNEEFHDDPLTQ FIAPPRPYAGNRDIFVFVDAGPEGLKRVALSGYSEATLARFFELPEEGRKPQEVLADLNTRYQPRTIALGIGGKRGVTRS LTKDSYAFLVDSLGAEAEARFVSAAPLIEEYLDTRIPEEWLHYQRLVMLTEAVVKEAFSPEVVVPGKTTVGDVRRFLYDR LWALGVDTWFQPDLRVQRKGADGASSRGFLAPAKEDVVILRGDLLHVDFGITYMGLNSDWQKMAYVLNEGETDAPEGLKR ALANTIELQDALMLRASRPGRTSAQVYTQTMAEMKEKGIEAMVYSHPLGNQGHALGASIDFRSASRQEEAKTLRLGSYIA IELNTATSVPEWDGQKVFVMQEDPAYLTEEGWKFFVSRQESFYLLGRDGQGGQRSQGAKGGKGVTTRGMPML >Mature_472_residues MKSAKWAALPLLLLAACATTGRQGAADDSPPRLMSWSEQISEREAWLEKRHGMLLDMMRRHGVGMWVVVNEEFHDDPLTQ FIAPPRPYAGNRDIFVFVDAGPEGLKRVALSGYSEATLARFFELPEEGRKPQEVLADLNTRYQPRTIALGIGGKRGVTRS LTKDSYAFLVDSLGAEAEARFVSAAPLIEEYLDTRIPEEWLHYQRLVMLTEAVVKEAFSPEVVVPGKTTVGDVRRFLYDR LWALGVDTWFQPDLRVQRKGADGASSRGFLAPAKEDVVILRGDLLHVDFGITYMGLNSDWQKMAYVLNEGETDAPEGLKR ALANTIELQDALMLRASRPGRTSAQVYTQTMAEMKEKGIEAMVYSHPLGNQGHALGASIDFRSASRQEEAKTLRLGSYIA IELNTATSVPEWDGQKVFVMQEDPAYLTEEGWKFFVSRQESFYLLGRDGQGGQRSQGAKGGKGVTTRGMPML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52528; Mature: 52528
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAKWAALPLLLLAACATTGRQGAADDSPPRLMSWSEQISEREAWLEKRHGMLLDMMRR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HGVGMWVVVNEEFHDDPLTQFIAPPRPYAGNRDIFVFVDAGPEGLKRVALSGYSEATLAR CCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHH FFELPEEGRKPQEVLADLNTRYQPRTIALGIGGKRGVTRSLTKDSYAFLVDSLGAEAEAR HHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHCCCCHHHH FVSAAPLIEEYLDTRIPEEWLHYQRLVMLTEAVVKEAFSPEVVVPGKTTVGDVRRFLYDR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHH LWALGVDTWFQPDLRVQRKGADGASSRGFLAPAKEDVVILRGDLLHVDFGITYMGLNSDW HHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEECEEEEECCCCH QKMAYVLNEGETDAPEGLKRALANTIELQDALMLRASRPGRTSAQVYTQTMAEMKEKGIE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCE AMVYSHPLGNQGHALGASIDFRSASRQEEAKTLRLGSYIAIELNTATSVPEWDGQKVFVM EEEEECCCCCCCCEECCEEECCCCCHHHHHHHEEECCEEEEEEECCCCCCCCCCCEEEEE QEDPAYLTEEGWKFFVSRQESFYLLGRDGQGGQRSQGAKGGKGVTTRGMPML ECCCCCHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKSAKWAALPLLLLAACATTGRQGAADDSPPRLMSWSEQISEREAWLEKRHGMLLDMMRR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HGVGMWVVVNEEFHDDPLTQFIAPPRPYAGNRDIFVFVDAGPEGLKRVALSGYSEATLAR CCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHH FFELPEEGRKPQEVLADLNTRYQPRTIALGIGGKRGVTRSLTKDSYAFLVDSLGAEAEAR HHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHCCCCHHHH FVSAAPLIEEYLDTRIPEEWLHYQRLVMLTEAVVKEAFSPEVVVPGKTTVGDVRRFLYDR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHH LWALGVDTWFQPDLRVQRKGADGASSRGFLAPAKEDVVILRGDLLHVDFGITYMGLNSDW HHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEECEEEEECCCCH QKMAYVLNEGETDAPEGLKRALANTIELQDALMLRASRPGRTSAQVYTQTMAEMKEKGIE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCE AMVYSHPLGNQGHALGASIDFRSASRQEEAKTLRLGSYIAIELNTATSVPEWDGQKVFVM EEEEECCCCCCCCEECCEEECCCCCHHHHHHHEEECCEEEEEEECCCCCCCCCCCEEEEE QEDPAYLTEEGWKFFVSRQESFYLLGRDGQGGQRSQGAKGGKGVTTRGMPML ECCCCCHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA