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The map label for this gene is glcA [H]

Identifier: 108763963

GI number: 108763963

Start: 6026828

End: 6028195

Strand: Reverse

Name: glcA [H]

Synonym: MXAN_4817

Alternate gene names: 108763963

Gene position: 6028195-6026828 (Counterclockwise)

Preceding gene: 108761031

Following gene: 108763188

Centisome position: 65.96

GC content: 66.67

Gene sequence:

>1368_bases
ATGCACAAACGACACGCATTGCGTTCGATGTTGTGGGCCGCGAGCAGTCTGGCGTTGGTTGGCGGCTGTTCCCCGGAGCC
GGAACTGTCCGACGCGGAAGCCCTTCCCCTGGTGACGCAGGAGCAAGGCGAGCGGGCCTATGACCCAGGACCGGGCTGGA
ACCTGGCGTGGCAGGACGACTTCACGGGCAACAGCCTCAACTCGGCCAACTGGACGGTGCTGACGAGCAACTTCGACCCT
GTCACCAACAACTGCAACTTCGGCACGGGGGAGCTGGAGTTCCCCCGCGCGCAGAACGTCACCGTCGCTGGCGGCAAGCT
CATCCTCACCGCGCAGCGGACGGCGGACGCGCCGTTTGACTCACGCTGCGCGGGTTACGGGCCACGTTCGTACTACTCGG
GCCGCATCCACTCGAAGGGCAAGGTGGAGCGCCGCTACGGCAAGCTGGTGGCGAGCATCAAGGTACCGTCCGGCTATGGC
ATGTGGCCCGCGTTCTGGACGCTGGGCGCGAACATCTCCAACGTCGGGTGGCCCCGGAGCGGCGAAATCGACATCCTCGA
GTGGCACTCCAACGACGCGTCGTGGATGAAGTCCGCCGCGCACTGGTTCGCCAATGGCGCGCAGCAGAGCTGGGGCACGG
GCGCGAACCGCGGGTACAGCATCGCGGATGGCTTCCACACGTACGAGGTGGAGTGGACGGCCAACCGGATGATCTTCCGC
CTGGACGGCGAGATTCGCGGCAACGAGTTCGCCCACAACGAGGCGGCCTTCCAGCAGAACCACTACATCCTCCTGAACCT
CGCCCTGGGCGGGAACTGGTACGGCCACCCGCACCCGGATGCGATTGGTCTGCCCTGGGGCCAGACGAAGACGATGGAGG
TGGAGTGGGTGCGCTGGTACCAGCCGGGGAGCACGCCGCCGCCCGCGTCACTCACCAACGCCAGCTTCGAGAACGGCATG
ACGGGCTGGGCCACCTGGAGCCCCAACGGCACCGAGGCCGCGGACTTCAGCGAGACGTACAACGGGGGCCGCACCGGCGC
CTATCACCTGACGCACTGGACGAATGGCACGCCCTTCGAGGTCTGGACGTACCAGCCGGTGCCGGGCCTCGCATCGGGCA
CATACAAGGTCCGCGCGTGGGTGCGAAAGAGCGGCGGGTTTGACCTGTCGCGCCTCCAGGCCAAGACGTGTGGCGAGTGC
GCGCCCGTGTTCACCAACCTGGGGAACCATGGCGACTGGACGATGGTGGAGACGCCGCCCATCTCCGTGACGGGAGGCTA
CCTGGAGCTGGGCTTCCACACCCGCGCCACGTCGGGCAACTCCGCCAACTTCATCCACATGGATGACGTGGAGCTCATCC
GCCTCTAG

Upstream 100 bases:

>100_bases
CCATCTAGGCGGTAATTCTTGAGAATCTAATATTGCAGCCAAAACTGCTTGTTTGATGGGGGAGGGCGGCTATGTCCCAG
GGGAACCCCTGGAGCAAGAC

Downstream 100 bases:

>100_bases
TCACGGCGTGAGCCAGGGCTACAGCACCATTCGCCAGAACAGTCCGGCCAGGGTGGTGTAGCCCACCGCCGCGCGTTCCA
CGCGTCCCTCCGAGGAGATG

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: (1->3)-beta-glucan endohydrolase; (1->3)-beta-glucanase A1 [H]

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MHKRHALRSMLWAASSLALVGGCSPEPELSDAEALPLVTQEQGERAYDPGPGWNLAWQDDFTGNSLNSANWTVLTSNFDP
VTNNCNFGTGELEFPRAQNVTVAGGKLILTAQRTADAPFDSRCAGYGPRSYYSGRIHSKGKVERRYGKLVASIKVPSGYG
MWPAFWTLGANISNVGWPRSGEIDILEWHSNDASWMKSAAHWFANGAQQSWGTGANRGYSIADGFHTYEVEWTANRMIFR
LDGEIRGNEFAHNEAAFQQNHYILLNLALGGNWYGHPHPDAIGLPWGQTKTMEVEWVRWYQPGSTPPPASLTNASFENGM
TGWATWSPNGTEAADFSETYNGGRTGAYHLTHWTNGTPFEVWTYQPVPGLASGTYKVRAWVRKSGGFDLSRLQAKTCGEC
APVFTNLGNHGDWTMVETPPISVTGGYLELGFHTRATSGNSANFIHMDDVELIRL

Sequences:

>Translated_455_residues
MHKRHALRSMLWAASSLALVGGCSPEPELSDAEALPLVTQEQGERAYDPGPGWNLAWQDDFTGNSLNSANWTVLTSNFDP
VTNNCNFGTGELEFPRAQNVTVAGGKLILTAQRTADAPFDSRCAGYGPRSYYSGRIHSKGKVERRYGKLVASIKVPSGYG
MWPAFWTLGANISNVGWPRSGEIDILEWHSNDASWMKSAAHWFANGAQQSWGTGANRGYSIADGFHTYEVEWTANRMIFR
LDGEIRGNEFAHNEAAFQQNHYILLNLALGGNWYGHPHPDAIGLPWGQTKTMEVEWVRWYQPGSTPPPASLTNASFENGM
TGWATWSPNGTEAADFSETYNGGRTGAYHLTHWTNGTPFEVWTYQPVPGLASGTYKVRAWVRKSGGFDLSRLQAKTCGEC
APVFTNLGNHGDWTMVETPPISVTGGYLELGFHTRATSGNSANFIHMDDVELIRL
>Mature_455_residues
MHKRHALRSMLWAASSLALVGGCSPEPELSDAEALPLVTQEQGERAYDPGPGWNLAWQDDFTGNSLNSANWTVLTSNFDP
VTNNCNFGTGELEFPRAQNVTVAGGKLILTAQRTADAPFDSRCAGYGPRSYYSGRIHSKGKVERRYGKLVASIKVPSGYG
MWPAFWTLGANISNVGWPRSGEIDILEWHSNDASWMKSAAHWFANGAQQSWGTGANRGYSIADGFHTYEVEWTANRMIFR
LDGEIRGNEFAHNEAAFQQNHYILLNLALGGNWYGHPHPDAIGLPWGQTKTMEVEWVRWYQPGSTPPPASLTNASFENGM
TGWATWSPNGTEAADFSETYNGGRTGAYHLTHWTNGTPFEVWTYQPVPGLASGTYKVRAWVRKSGGFDLSRLQAKTCGEC
APVFTNLGNHGDWTMVETPPISVTGGYLELGFHTRATSGNSANFIHMDDVELIRL

Specific function: Lysis of cellular walls containing beta-1,3-glucans. Implicated in the defense against fungal pathogens [H]

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR008263 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: =3.2.1.39 [H]

Molecular weight: Translated: 50136; Mature: 50136

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKRHALRSMLWAASSLALVGGCSPEPELSDAEALPLVTQEQGERAYDPGPGWNLAWQDD
CCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCC
FTGNSLNSANWTVLTSNFDPVTNNCNFGTGELEFPRAQNVTVAGGKLILTAQRTADAPFD
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCEEEEEECCCCCCCCC
SRCAGYGPRSYYSGRIHSKGKVERRYGKLVASIKVPSGYGMWPAFWTLGANISNVGWPRS
CCCCCCCCCHHCCCCCCCCCCHHHHHCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCC
GEIDILEWHSNDASWMKSAAHWFANGAQQSWGTGANRGYSIADGFHTYEVEWTANRMIFR
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEEEEECCEEEEE
LDGEIRGNEFAHNEAAFQQNHYILLNLALGGNWYGHPHPDAIGLPWGQTKTMEVEWVRWY
ECCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
QPGSTPPPASLTNASFENGMTGWATWSPNGTEAADFSETYNGGRTGAYHLTHWTNGTPFE
CCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCEE
VWTYQPVPGLASGTYKVRAWVRKSGGFDLSRLQAKTCGECAPVFTNLGNHGDWTMVETPP
EEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCC
ISVTGGYLELGFHTRATSGNSANFIHMDDVELIRL
CEEECCEEEEEEEEECCCCCCCEEEEECCEEEEEC
>Mature Secondary Structure
MHKRHALRSMLWAASSLALVGGCSPEPELSDAEALPLVTQEQGERAYDPGPGWNLAWQDD
CCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCC
FTGNSLNSANWTVLTSNFDPVTNNCNFGTGELEFPRAQNVTVAGGKLILTAQRTADAPFD
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCEEEEEECCCCCCCCC
SRCAGYGPRSYYSGRIHSKGKVERRYGKLVASIKVPSGYGMWPAFWTLGANISNVGWPRS
CCCCCCCCCHHCCCCCCCCCCHHHHHCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCC
GEIDILEWHSNDASWMKSAAHWFANGAQQSWGTGANRGYSIADGFHTYEVEWTANRMIFR
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEEEEECCEEEEE
LDGEIRGNEFAHNEAAFQQNHYILLNLALGGNWYGHPHPDAIGLPWGQTKTMEVEWVRWY
ECCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
QPGSTPPPASLTNASFENGMTGWATWSPNGTEAADFSETYNGGRTGAYHLTHWTNGTPFE
CCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCEE
VWTYQPVPGLASGTYKVRAWVRKSGGFDLSRLQAKTCGECAPVFTNLGNHGDWTMVETPP
EEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCC
ISVTGGYLELGFHTRATSGNSANFIHMDDVELIRL
CEEECCEEEEEEEEECCCCCCCEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2311931 [H]