| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hcaC [C]
Identifier: 108763925
GI number: 108763925
Start: 3213017
End: 3213334
Strand: Direct
Name: hcaC [C]
Synonym: MXAN_2758
Alternate gene names: 108763925
Gene position: 3213017-3213334 (Clockwise)
Preceding gene: 108757233
Following gene: 108761889
Centisome position: 35.15
GC content: 65.09
Gene sequence:
>318_bases ATGACGAAGATCAAGCTGGGACCGGCGGACTTCGCCGAGAGGGAAATGCGGGGCTACGAGGTCGGCAAGCGCAACGTGTG TATCGCGAAGATCCACGGGCGCTACAAGGGCCTGGATGACTGGTGCAACCACGCCGGGTGTCTGCTGTCCGGCGGTCGCA TCGAGGACAACATGGTCGTCTGCCCGTGCCATGAGGTCGGTTTCGACATGGACACCGGGCGCAACGCGACCTCGCCGGGG GTCTGTGACGACCAGCCGACGGTGCAGGTCGCGGTCGAAGACGGCTCGCTCGTCATCGATTGGCCCGACACGCCCTGA
Upstream 100 bases:
>100_bases CGACAACGGTGGGGATGGTCACGTCGGGAGTCACGGGGAGAAGGTAATGCCCGGGCATCGGGAGTGCAGCCAGTCCCGCG TTGTGGGAAAAGGGGCCGCG
Downstream 100 bases:
>100_bases AGTCCCTCTCGCACTCCGGAGTACCTGTCATGGCACACGACCACGACCACGACCACGACCATGGGCCTCACGGGCACCAT CATCATGACCACGGGCCTCA
Product: Rieske family iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTKIKLGPADFAEREMRGYEVGKRNVCIAKIHGRYKGLDDWCNHAGCLLSGGRIEDNMVVCPCHEVGFDMDTGRNATSPG VCDDQPTVQVAVEDGSLVIDWPDTP
Sequences:
>Translated_105_residues MTKIKLGPADFAEREMRGYEVGKRNVCIAKIHGRYKGLDDWCNHAGCLLSGGRIEDNMVVCPCHEVGFDMDTGRNATSPG VCDDQPTVQVAVEDGSLVIDWPDTP >Mature_104_residues TKIKLGPADFAEREMRGYEVGKRNVCIAKIHGRYKGLDDWCNHAGCLLSGGRIEDNMVVCPCHEVGFDMDTGRNATSPGV CDDQPTVQVAVEDGSLVIDWPDTP
Specific function: Part Of Multicomponent 3-Phenylpropionate Dioxygenase. That Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). This Protein Seems To Be A 2fe-2s Ferredoxin. [C]
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11481; Mature: 11350
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIKLGPADFAEREMRGYEVGKRNVCIAKIHGRYKGLDDWCNHAGCLLSGGRIEDNMVV CCEEECCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCCEEEECCEECCCEEE CPCHEVGFDMDTGRNATSPGVCDDQPTVQVAVEDGSLVIDWPDTP EEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCC >Mature Secondary Structure TKIKLGPADFAEREMRGYEVGKRNVCIAKIHGRYKGLDDWCNHAGCLLSGGRIEDNMVV CEEECCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCCEEEECCEECCCEEE CPCHEVGFDMDTGRNATSPGVCDDQPTVQVAVEDGSLVIDWPDTP EEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA