| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763906
Identifier: 108763906
GI number: 108763906
Start: 6556680
End: 6558374
Strand: Direct
Name: 108763906
Synonym: MXAN_5262
Alternate gene names: NA
Gene position: 6556680-6558374 (Clockwise)
Preceding gene: 108762244
Following gene: 108760680
Centisome position: 71.74
GC content: 70.97
Gene sequence:
>1695_bases GTGTGGCGCGCCAGGGCGGCCCCATCCGGTGTTCCGAGGTGTCCTCCAGGCCCAGGTGTCGCGCGGGAGGTGTCACCCCA GCGGTGGGCGCCGAAGCGTCGGATTTCCTCCGGGGGGCTGCCCTCCAGGGCAGTTGGCGTCCGCCACCGGGGGTCTCACC GTCACCGGGTTTCGGGCAGGCGAGGGAGTGTGCACATGCGCGTCGGGTTCTGGTGGGTCCTGGCTGGCCTGGGGTTGGCG GGTCTGGGGTGCGGTGAGTCCGTGGATGCGGCGGCAGTGGATGCGGTGAAGGAGACCTCGGAGGTGCCAGTGCAGGCCCT GGCCTGCGCGCCGCCGGGCGCCGTCTACAAGGTGAAGGACGTCCTGCCGCCGGGTGTGCCGGTGCCTTCCAACGCCTTGC CGGTCCCCGACTGGCTGACGAACGCGGAGGGCACGCTCTTCTTCGTGGTCGACCTCTTCGACGGCCCCGGCGTCCTGTGG CGCAGTGACGGCACCTCCGTGGGCACCGTGCCTGTGAAGGAGTTCCCCGTGATTGCGGGGACCTACCGCGACTTCTCGCC GCTCGTCGCGGTGGGGACTCGCGTCTTCTTTCTGGTGAAGGACCCCGTGGTCGGACGGGAACTGTGGGTCAGCGATGGCA CTGAGGCGGGCACGCGGCTCGTGCGGGACTTCGCGCCAGGCCCCGCCAGTGACGACCTGATGCTCTTCGCTTCGGTGGGG GATGTGCTGACCTTCTTCCGCCGACCGGCCTCGAGGGGGCCGCTGGAGCTGTGGCGCTCGGACGGGACTGAGGTGGGAAC GTTCCGCTTGGTGACCTTCGGCGCGCAGGACTCGTTTGAGTCGGGGGTGCCCCCGGTCGCGGGAGCGCTGCTGTTCACCC TGCACGACGCGGCGAATGGCACCTACCTGTGGCGGACGGATGGCACGGCGGCGGGGACCACGGTCGTCAAGCGGCTGGAC GCAGATCTGGTCTGGACGCAGGGCACGGCCGTCACTGCGACGGGCCTGAGCGTGTTTTCCTTCTACGATGAAGGCCCCAT CACGGAGGTGTGGCGGACGGATGGCACGCCGGGCGGCACGGTGCGCCTGGACTCCTTCGGCGGCTACGTGAGGTTGCTGG GCGCGCTGGGTGGGTATGTCTACGTGGCCTCTGGCACCGCGGGCGGCTCCGCGTTGAAGCTCTCCCGCCTGTCGCTCGCG GGCGGTGGCAAGGCGACGGCGACGTGGCTGCCCAACCGCTACGCGGGCCAGCCCGACGCGCGGCCCTACGTCGAGTACTC GGCGGTCGCGGGCGGGAAGCTCTACGTGTCCATGGCCATTGGCACCTCGGGGCCCGCGCCGCGCGAAGTGGGCCTCTGGG TGACGGATGGCACGGAAGCGGGGACACGGGAGCTCAGCCGGGGGCTCTTCACCGGCGACGAGAACTACTCGCCGCTCTTC GACACCGGTGCCGGGACGCTGCTCTTCAGCGCGGACGGCGGCGAGACGGGGTTGGAGCCCTGGGTGACGGACGGCACGCC CGGACGGACGGGGCTGGTCGCGGACCTCTCTCCGTTGGGGGGCTCCAACCCACAGTCCTTCACCCGGGTGGGCAGCACCC TCTTCTTCCGGGCCCGCTCTGACACGCGAGGCAACGCGCTGTGGGCCATGCCCGCCACCGTGGCCTGTCCCACGCAGGAA GTCCACGCCCGCTGA
Upstream 100 bases:
>100_bases CATGAAGCGGCGAGGCGGGAGGCATTCATGCAAGGCTCCTTTCGGATGGGGAAGCCCGAGATGATGAATCACCCCTTCCT CGCGCTGAAGCACGCACCAG
Downstream 100 bases:
>100_bases TGCACCGCGATGTGCGAGGCTGGGGCCATGTCCCCGGAGGTCCTCGCGCTCCTGCTCCAGAACCGCCAGCGCTTCCTCGC CTTCCTGACCCCACACGTCG
Product: putative lipoprotein
Products: NA
Alternate protein names: Hyalin Repeat Protein; Hyalin Repeat-Containing Protein; Quinoprotein; Cycloinulo-Oligosaccharide Fructanotransferase; Cadherin; Cna B Domain-Containing Protein
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MWRARAAPSGVPRCPPGPGVAREVSPQRWAPKRRISSGGLPSRAVGVRHRGSHRHRVSGRRGSVHMRVGFWWVLAGLGLA GLGCGESVDAAAVDAVKETSEVPVQALACAPPGAVYKVKDVLPPGVPVPSNALPVPDWLTNAEGTLFFVVDLFDGPGVLW RSDGTSVGTVPVKEFPVIAGTYRDFSPLVAVGTRVFFLVKDPVVGRELWVSDGTEAGTRLVRDFAPGPASDDLMLFASVG DVLTFFRRPASRGPLELWRSDGTEVGTFRLVTFGAQDSFESGVPPVAGALLFTLHDAANGTYLWRTDGTAAGTTVVKRLD ADLVWTQGTAVTATGLSVFSFYDEGPITEVWRTDGTPGGTVRLDSFGGYVRLLGALGGYVYVASGTAGGSALKLSRLSLA GGGKATATWLPNRYAGQPDARPYVEYSAVAGGKLYVSMAIGTSGPAPREVGLWVTDGTEAGTRELSRGLFTGDENYSPLF DTGAGTLLFSADGGETGLEPWVTDGTPGRTGLVADLSPLGGSNPQSFTRVGSTLFFRARSDTRGNALWAMPATVACPTQE VHAR
Sequences:
>Translated_564_residues MWRARAAPSGVPRCPPGPGVAREVSPQRWAPKRRISSGGLPSRAVGVRHRGSHRHRVSGRRGSVHMRVGFWWVLAGLGLA GLGCGESVDAAAVDAVKETSEVPVQALACAPPGAVYKVKDVLPPGVPVPSNALPVPDWLTNAEGTLFFVVDLFDGPGVLW RSDGTSVGTVPVKEFPVIAGTYRDFSPLVAVGTRVFFLVKDPVVGRELWVSDGTEAGTRLVRDFAPGPASDDLMLFASVG DVLTFFRRPASRGPLELWRSDGTEVGTFRLVTFGAQDSFESGVPPVAGALLFTLHDAANGTYLWRTDGTAAGTTVVKRLD ADLVWTQGTAVTATGLSVFSFYDEGPITEVWRTDGTPGGTVRLDSFGGYVRLLGALGGYVYVASGTAGGSALKLSRLSLA GGGKATATWLPNRYAGQPDARPYVEYSAVAGGKLYVSMAIGTSGPAPREVGLWVTDGTEAGTRELSRGLFTGDENYSPLF DTGAGTLLFSADGGETGLEPWVTDGTPGRTGLVADLSPLGGSNPQSFTRVGSTLFFRARSDTRGNALWAMPATVACPTQE VHAR >Mature_564_residues MWRARAAPSGVPRCPPGPGVAREVSPQRWAPKRRISSGGLPSRAVGVRHRGSHRHRVSGRRGSVHMRVGFWWVLAGLGLA GLGCGESVDAAAVDAVKETSEVPVQALACAPPGAVYKVKDVLPPGVPVPSNALPVPDWLTNAEGTLFFVVDLFDGPGVLW RSDGTSVGTVPVKEFPVIAGTYRDFSPLVAVGTRVFFLVKDPVVGRELWVSDGTEAGTRLVRDFAPGPASDDLMLFASVG DVLTFFRRPASRGPLELWRSDGTEVGTFRLVTFGAQDSFESGVPPVAGALLFTLHDAANGTYLWRTDGTAAGTTVVKRLD ADLVWTQGTAVTATGLSVFSFYDEGPITEVWRTDGTPGGTVRLDSFGGYVRLLGALGGYVYVASGTAGGSALKLSRLSLA GGGKATATWLPNRYAGQPDARPYVEYSAVAGGKLYVSMAIGTSGPAPREVGLWVTDGTEAGTRELSRGLFTGDENYSPLF DTGAGTLLFSADGGETGLEPWVTDGTPGRTGLVADLSPLGGSNPQSFTRVGSTLFFRARSDTRGNALWAMPATVACPTQE VHAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59225; Mature: 59225
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRARAAPSGVPRCPPGPGVAREVSPQRWAPKRRISSGGLPSRAVGVRHRGSHRHRVSGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHCCCCCCCCCCCCCCCC RGSVHMRVGFWWVLAGLGLAGLGCGESVDAAAVDAVKETSEVPVQALACAPPGAVYKVKD CCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEHH VLPPGVPVPSNALPVPDWLTNAEGTLFFVVDLFDGPGVLWRSDGTSVGTVPVKEFPVIAG CCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCEEECCCCCEECEEEHHHCCEEEE TYRDFSPLVAVGTRVFFLVKDPVVGRELWVSDGTEAGTRLVRDFAPGPASDDLMLFASVG CCCCCCHHHHHCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEHHH DVLTFFRRPASRGPLELWRSDGTEVGTFRLVTFGAQDSFESGVPPVAGALLFTLHDAANG HHHHHHHCCCCCCCHHHHHCCCCEEEEEEEEEECCCCCHHCCCCHHHHEEEEEEEECCCC TYLWRTDGTAAGTTVVKRLDADLVWTQGTAVTATGLSVFSFYDEGPITEVWRTDGTPGGT EEEEECCCCCHHHHHHHHHCCCEEEECCCEEEECCCEEEEECCCCCCCHHEECCCCCCCE VRLDSFGGYVRLLGALGGYVYVASGTAGGSALKLSRLSLAGGGKATATWLPNRYAGQPDA EEECCCCCHHHHHHHHCCEEEEEECCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCC RPYVEYSAVAGGKLYVSMAIGTSGPAPREVGLWVTDGTEAGTRELSRGLFTGDENYSPLF CCCEEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCE DTGAGTLLFSADGGETGLEPWVTDGTPGRTGLVADLSPLGGSNPQSFTRVGSTLFFRARS ECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCEEEEEECC DTRGNALWAMPATVACPTQEVHAR CCCCCEEEECCCEEECCCHHHCCC >Mature Secondary Structure MWRARAAPSGVPRCPPGPGVAREVSPQRWAPKRRISSGGLPSRAVGVRHRGSHRHRVSGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHCCCCCCCCCCCCCCCC RGSVHMRVGFWWVLAGLGLAGLGCGESVDAAAVDAVKETSEVPVQALACAPPGAVYKVKD CCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEHH VLPPGVPVPSNALPVPDWLTNAEGTLFFVVDLFDGPGVLWRSDGTSVGTVPVKEFPVIAG CCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCEEECCCCCEECEEEHHHCCEEEE TYRDFSPLVAVGTRVFFLVKDPVVGRELWVSDGTEAGTRLVRDFAPGPASDDLMLFASVG CCCCCCHHHHHCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEHHH DVLTFFRRPASRGPLELWRSDGTEVGTFRLVTFGAQDSFESGVPPVAGALLFTLHDAANG HHHHHHHCCCCCCCHHHHHCCCCEEEEEEEEEECCCCCHHCCCCHHHHEEEEEEEECCCC TYLWRTDGTAAGTTVVKRLDADLVWTQGTAVTATGLSVFSFYDEGPITEVWRTDGTPGGT EEEEECCCCCHHHHHHHHHCCCEEEECCCEEEECCCEEEEECCCCCCCHHEECCCCCCCE VRLDSFGGYVRLLGALGGYVYVASGTAGGSALKLSRLSLAGGGKATATWLPNRYAGQPDA EEECCCCCHHHHHHHHCCEEEEEECCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCC RPYVEYSAVAGGKLYVSMAIGTSGPAPREVGLWVTDGTEAGTRELSRGLFTGDENYSPLF CCCEEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCE DTGAGTLLFSADGGETGLEPWVTDGTPGRTGLVADLSPLGGSNPQSFTRVGSTLFFRARS ECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCEEEEEECC DTRGNALWAMPATVACPTQEVHAR CCCCCEEEECCCEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA