| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763828
Identifier: 108763828
GI number: 108763828
Start: 5470395
End: 5471033
Strand: Reverse
Name: 108763828
Synonym: MXAN_4418
Alternate gene names: NA
Gene position: 5471033-5470395 (Counterclockwise)
Preceding gene: 108758593
Following gene: 108759960
Centisome position: 59.86
GC content: 67.14
Gene sequence:
>639_bases GTGAGCCAGCCCTTCTGGCTGTTCTGGTTCTTCGAGAACATCTCCGTCGCCGGCCGATGGATGATGGAGATTGCGGGCGG TTGGCTGGTGGCCCGGCTCGCGGATTCGGCGGCGCAGGTCGCGTCATTAATCAGCATCGCCAGCATTCCGGTGCTGGTGA GCATGGCCTGGGCGGGGCAGGTGGCGGATCGCTACGACCGGCGGCGGACGGTCCTGCTGATGGGGCCAGGGCTGGCGGTG ACCGCGCCCAGGTGGGCCGGCATGCGGCTCGTGTGCGCCCCCTTGGTGGTGGGACTGGCGCAGGTGGGCCTCTCCTATTC GACCTCGCCGCTGGGGGCCGCGGTCATGCTGGCCATCAGCTCCTTCGGCATCGCCACCCTGGCCGGGCTGACACTGATGT TCATCCAGCTCACGTGTCCCCAGGACCTCCAGGGGCGGCTGTTGGGCCTTCACAACATCCTGTTCGCGGTCGTCCCTCCC GCGGGCATCGTCATGGGCATGTTGACCCACTATGTCGAGCTGCGCGTCAGCATGCGCTTCTTCGGGCTGCTGTTCGCCGG GGTTTCGACGGCGTGGTTGCTGCTCGCGCGGATTGGATCCGCGGACCTCACGAGGGCGGAAGGAAACGGTGTCGTATGA
Upstream 100 bases:
>100_bases GAGTTCTCCTGACGCCCCCGCCCATGCCGGGGAGGCCCTCGGCCGGGGAGACCCGGCCCTGGCATTGGCAGCCCTGCCCG GGGGGCCGCCCGCCGGCTTC
Downstream 100 bases:
>100_bases GTGCCTCCAGTTCTTCAGACATCCTGGCGCGGTTCGAGAAACTCGTCCGGCGGCGCGCGGTGTCCTCCGACCCCGCGTGG CGCATGGAGAGCGGGGAGGG
Product: putative transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSQPFWLFWFFENISVAGRWMMEIAGGWLVARLADSAAQVASLISIASIPVLVSMAWAGQVADRYDRRRTVLLMGPGLAV TAPRWAGMRLVCAPLVVGLAQVGLSYSTSPLGAAVMLAISSFGIATLAGLTLMFIQLTCPQDLQGRLLGLHNILFAVVPP AGIVMGMLTHYVELRVSMRFFGLLFAGVSTAWLLLARIGSADLTRAEGNGVV
Sequences:
>Translated_212_residues MSQPFWLFWFFENISVAGRWMMEIAGGWLVARLADSAAQVASLISIASIPVLVSMAWAGQVADRYDRRRTVLLMGPGLAV TAPRWAGMRLVCAPLVVGLAQVGLSYSTSPLGAAVMLAISSFGIATLAGLTLMFIQLTCPQDLQGRLLGLHNILFAVVPP AGIVMGMLTHYVELRVSMRFFGLLFAGVSTAWLLLARIGSADLTRAEGNGVV >Mature_211_residues SQPFWLFWFFENISVAGRWMMEIAGGWLVARLADSAAQVASLISIASIPVLVSMAWAGQVADRYDRRRTVLLMGPGLAVT APRWAGMRLVCAPLVVGLAQVGLSYSTSPLGAAVMLAISSFGIATLAGLTLMFIQLTCPQDLQGRLLGLHNILFAVVPPA GIVMGMLTHYVELRVSMRFFGLLFAGVSTAWLLLARIGSADLTRAEGNGVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22681; Mature: 22550
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPFWLFWFFENISVAGRWMMEIAGGWLVARLADSAAQVASLISIASIPVLVSMAWAGQ CCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VADRYDRRRTVLLMGPGLAVTAPRWAGMRLVCAPLVVGLAQVGLSYSTSPLGAAVMLAIS HHHHHCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SFGIATLAGLTLMFIQLTCPQDLQGRLLGLHNILFAVVPPAGIVMGMLTHYVELRVSMRF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FGLLFAGVSTAWLLLARIGSADLTRAEGNGVV HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC >Mature Secondary Structure SQPFWLFWFFENISVAGRWMMEIAGGWLVARLADSAAQVASLISIASIPVLVSMAWAGQ CCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VADRYDRRRTVLLMGPGLAVTAPRWAGMRLVCAPLVVGLAQVGLSYSTSPLGAAVMLAIS HHHHHCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SFGIATLAGLTLMFIQLTCPQDLQGRLLGLHNILFAVVPPAGIVMGMLTHYVELRVSMRF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FGLLFAGVSTAWLLLARIGSADLTRAEGNGVV HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA