| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763768
Identifier: 108763768
GI number: 108763768
Start: 2701085
End: 2702548
Strand: Reverse
Name: 108763768
Synonym: MXAN_2323
Alternate gene names: NA
Gene position: 2702548-2701085 (Counterclockwise)
Preceding gene: 108758303
Following gene: 108757000
Centisome position: 29.57
GC content: 68.65
Gene sequence:
>1464_bases ATGGCGCGAGGAGCACCTCCCGGGACGAAACTGGAGGTAGATTGCGCCTGGCGGGCGCGGCCGGCAGCCCCTTTCACGGA CGTGCAACGAGTGATGAGCAGACGCGTGTGGGTTCGATGCGCGGCGCTGGGGCTGAGCCTCCTGGCGTCCCAGGCACCGG CGCAAATCACGGAGTCAGACCCGGTCGTCGAGGAAGTGGTGGTCCGCGGCCCGGAGAAGACCCAGCCGGACACGGTGCGC GCCTATGCGCGTGTGGGGGAAGGAGACCCGCTCACGCTCGAGGACCTGGCCAAGGTCGAGCGGCGGCTGGTCGCCACGGG CCTCTTCCAGGAGGTGAAGGTCAGCTACGAGCCTTCCGGGCCGGGCCGGGTGCGGCTGATTCTGGAGGTGGAGGACAAGG CATCCTGGGTGGTGGCGCCCACCTTCGTGCTGCAATCCGACAACGTCGGCGGCGGCGTGCTGTACGCGGAGAACAACCTC TGGGGCCGCAGCAAGAAGTTCGCGACCGCGGCCCAGGTGAGCACGGCGGAGAGCGGCATCTTCGCGGGCTTCCTGGACCC GAACCTCTTCGGGCTGCCCCAGCTCCGCTTCAGCCTGGAAGGCCAGCTTCGCAGCGACCGGGTAGACGAGTACCAGGCCG GCTCCGGCCAGCGGCGCCCAGAGGTGGTGCGACGGACGCGGATGAACTCCGCGTCCATCGCCGGAGAGCTGGGCTTCCTG CTGTTCGAGCGCGTCCGCGCGGCGGCCAAGTACCGGCTGATGTCCATCGACGCGAAGTCCCCCGACACCGCCGAGGAGGT GACGACGCCCGCGTTCTCCCTGGGCCCGTCGCAGCAGGATGCGTCCCTGCGGCTGATGGTGGGCATCGACACGCGGCAGA ACCTGCACGCGGTGATGGAGGGCCTCAACCTGGAGGCTTCCTACGAGCTCTCCAATCCCGGCGTCGGCAGTGACTTCCGC TACGAGCGCTTCGGACTGCTGTACCGCCATGGCCTGCGGCTGGTGGGTGAACACAACCTGGTGCTGCGCGGCGAGGCCGT GGCGGGGGTGGACCTGCCGTTCCATCAGGAGTTCGTGATGGGCGGCAATTCACTGCGCGGCTTCGTCTACCGTCAGTTCC GGGGCGACACGCGCCTGTCCTTCACCGCCGAGTACCACTTCCCCCTCTTCACGGTGAACCCGCTGTCCTTCCGCGGCGTC GCCTTCTCCGACACGGGGATGATGATGTGGCGCAAGCTGCCCGGGGACCGGGAGTTGCGGGACGTCAATGGGCGCGTGGT GCGCAGCTACCTACCGGATACGGAAGACGGGCTGGGGAACGCCACGGTGGCCCAGGGCGTGGGCGCCGGCCTGCGGCTGT ACCTGCGCAACATCGTGCTGCCCCTGGTGGGCGTGGACGCGGCCTACAGCGTCAACTCGGGCGAGTTCCGCTTCTATCTG GTGGCGGGTGTGAATCCGTCCTAG
Upstream 100 bases:
>100_bases AGGTAGCCCAGCCAGGCCTCCGGAAAGGGGCGGCGAAGCAGTCGCCGACGCCGGAACTGGCGGATGAAGGAGAACATGCG CCCTGGCATAGCAGACGCGC
Downstream 100 bases:
>100_bases GGACGACACGTCAGGCGGCCCCGTGGTGGGGCGTCGGGTGCGGCGCGCCATGCCTCCATGTCATGAGGACATGCGCGTCT CCCCTCCCCGCTTCCCGCGA
Product: OMP85 family outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein/Protective Antigen; Surface Antigen Variable Number Repeat Protein; OMP85 Family Outer Membrane Protein
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MARGAPPGTKLEVDCAWRARPAAPFTDVQRVMSRRVWVRCAALGLSLLASQAPAQITESDPVVEEVVVRGPEKTQPDTVR AYARVGEGDPLTLEDLAKVERRLVATGLFQEVKVSYEPSGPGRVRLILEVEDKASWVVAPTFVLQSDNVGGGVLYAENNL WGRSKKFATAAQVSTAESGIFAGFLDPNLFGLPQLRFSLEGQLRSDRVDEYQAGSGQRRPEVVRRTRMNSASIAGELGFL LFERVRAAAKYRLMSIDAKSPDTAEEVTTPAFSLGPSQQDASLRLMVGIDTRQNLHAVMEGLNLEASYELSNPGVGSDFR YERFGLLYRHGLRLVGEHNLVLRGEAVAGVDLPFHQEFVMGGNSLRGFVYRQFRGDTRLSFTAEYHFPLFTVNPLSFRGV AFSDTGMMMWRKLPGDRELRDVNGRVVRSYLPDTEDGLGNATVAQGVGAGLRLYLRNIVLPLVGVDAAYSVNSGEFRFYL VAGVNPS
Sequences:
>Translated_487_residues MARGAPPGTKLEVDCAWRARPAAPFTDVQRVMSRRVWVRCAALGLSLLASQAPAQITESDPVVEEVVVRGPEKTQPDTVR AYARVGEGDPLTLEDLAKVERRLVATGLFQEVKVSYEPSGPGRVRLILEVEDKASWVVAPTFVLQSDNVGGGVLYAENNL WGRSKKFATAAQVSTAESGIFAGFLDPNLFGLPQLRFSLEGQLRSDRVDEYQAGSGQRRPEVVRRTRMNSASIAGELGFL LFERVRAAAKYRLMSIDAKSPDTAEEVTTPAFSLGPSQQDASLRLMVGIDTRQNLHAVMEGLNLEASYELSNPGVGSDFR YERFGLLYRHGLRLVGEHNLVLRGEAVAGVDLPFHQEFVMGGNSLRGFVYRQFRGDTRLSFTAEYHFPLFTVNPLSFRGV AFSDTGMMMWRKLPGDRELRDVNGRVVRSYLPDTEDGLGNATVAQGVGAGLRLYLRNIVLPLVGVDAAYSVNSGEFRFYL VAGVNPS >Mature_486_residues ARGAPPGTKLEVDCAWRARPAAPFTDVQRVMSRRVWVRCAALGLSLLASQAPAQITESDPVVEEVVVRGPEKTQPDTVRA YARVGEGDPLTLEDLAKVERRLVATGLFQEVKVSYEPSGPGRVRLILEVEDKASWVVAPTFVLQSDNVGGGVLYAENNLW GRSKKFATAAQVSTAESGIFAGFLDPNLFGLPQLRFSLEGQLRSDRVDEYQAGSGQRRPEVVRRTRMNSASIAGELGFLL FERVRAAAKYRLMSIDAKSPDTAEEVTTPAFSLGPSQQDASLRLMVGIDTRQNLHAVMEGLNLEASYELSNPGVGSDFRY ERFGLLYRHGLRLVGEHNLVLRGEAVAGVDLPFHQEFVMGGNSLRGFVYRQFRGDTRLSFTAEYHFPLFTVNPLSFRGVA FSDTGMMMWRKLPGDRELRDVNGRVVRSYLPDTEDGLGNATVAQGVGAGLRLYLRNIVLPLVGVDAAYSVNSGEFRFYLV AGVNPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53494; Mature: 53363
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGAPPGTKLEVDCAWRARPAAPFTDVQRVMSRRVWVRCAALGLSLLASQAPAQITESD CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PVVEEVVVRGPEKTQPDTVRAYARVGEGDPLTLEDLAKVERRLVATGLFQEVKVSYEPSG CHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHEEEEECCCC PGRVRLILEVEDKASWVVAPTFVLQSDNVGGGVLYAENNLWGRSKKFATAAQVSTAESGI CCEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCE FAGFLDPNLFGLPQLRFSLEGQLRSDRVDEYQAGSGQRRPEVVRRTRMNSASIAGELGFL EEEECCCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHH LFERVRAAAKYRLMSIDAKSPDTAEEVTTPAFSLGPSQQDASLRLMVGIDTRQNLHAVME HHHHHHHHHHEEEEEECCCCCCCHHHHCCCCEECCCCCCCCEEEEEEECCCCHHHHHHHH GLNLEASYELSNPGVGSDFRYERFGLLYRHGLRLVGEHNLVLRGEAVAGVDLPFHQEFVM CCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCEEEECCEEEECCCCCCHHHHH GGNSLRGFVYRQFRGDTRLSFTAEYHFPLFTVNPLSFRGVAFSDTGMMMWRKLPGDRELR CCCCCCEEEEEEECCCCEEEEEEEECCEEEEECCCEECCEEEECCCHHHEECCCCCCCCH DVNGRVVRSYLPDTEDGLGNATVAQGVGAGLRLYLRNIVLPLVGVDAAYSVNSGEFRFYL HCCCCEEEHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE VAGVNPS EECCCCC >Mature Secondary Structure ARGAPPGTKLEVDCAWRARPAAPFTDVQRVMSRRVWVRCAALGLSLLASQAPAQITESD CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PVVEEVVVRGPEKTQPDTVRAYARVGEGDPLTLEDLAKVERRLVATGLFQEVKVSYEPSG CHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHEEEEECCCC PGRVRLILEVEDKASWVVAPTFVLQSDNVGGGVLYAENNLWGRSKKFATAAQVSTAESGI CCEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCE FAGFLDPNLFGLPQLRFSLEGQLRSDRVDEYQAGSGQRRPEVVRRTRMNSASIAGELGFL EEEECCCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHH LFERVRAAAKYRLMSIDAKSPDTAEEVTTPAFSLGPSQQDASLRLMVGIDTRQNLHAVME HHHHHHHHHHEEEEEECCCCCCCHHHHCCCCEECCCCCCCCEEEEEEECCCCHHHHHHHH GLNLEASYELSNPGVGSDFRYERFGLLYRHGLRLVGEHNLVLRGEAVAGVDLPFHQEFVM CCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCEEEECCEEEECCCCCCHHHHH GGNSLRGFVYRQFRGDTRLSFTAEYHFPLFTVNPLSFRGVAFSDTGMMMWRKLPGDRELR CCCCCCEEEEEEECCCCEEEEEEEECCEEEEECCCEECCEEEECCCHHHEECCCCCCCCH DVNGRVVRSYLPDTEDGLGNATVAQGVGAGLRLYLRNIVLPLVGVDAAYSVNSGEFRFYL HCCCCEEEHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE VAGVNPS EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA